Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.78□□□□□ -1.96
LSM3P62310 HMGN1P11-201ENST00000508668 303 ntBASIC2.78□□□□□ -1.96
LSM3P62310 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.78□□□□□ -1.96
LSM3P62310 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM3P62310 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LSM3P62310 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM3P62310 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM3P62310 AC023043.3-201ENST00000593113 385 ntBASIC2.78□□□□□ -1.96
LSM3P62310 AC008745.1-201ENST00000604064 271 ntBASIC2.78□□□□□ -1.96
LSM3P62310 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
LSM3P62310 uc_338.25-201ENST00000613756 156 ntBASIC2.78□□□□□ -1.96
LSM3P62310 MLECP1-201ENST00000615893 709 ntBASIC2.78□□□□□ -1.96
LSM3P62310 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM3P62310 AC048347.1-201ENST00000624621 427 ntBASIC2.78□□□□□ -1.96
LSM3P62310 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM3P62310 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
LSM3P62310 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM3P62310 USP8P1-201ENST00000494673 3183 ntBASIC2.78□□□□□ -1.96
LSM3P62310 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.77□□□□□ -1.97
LSM3P62310 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
LSM3P62310 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM3P62310 RPL31P1-201ENST00000398116 372 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AL035423.1-201ENST00000420331 213 ntBASIC2.77□□□□□ -1.97
LSM3P62310 FAR2P4-202ENST00000425399 584 ntBASIC2.77□□□□□ -1.97
LSM3P62310 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM3P62310 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM3P62310 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM3P62310 RPS20P32-201ENST00000456044 356 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AP002371.1-201ENST00000463604 433 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.77□□□□□ -1.97
LSM3P62310 RPL7P38-201ENST00000488396 739 ntBASIC2.77□□□□□ -1.97
LSM3P62310 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
LSM3P62310 HAUS1P1-201ENST00000505275 832 ntBASIC2.77□□□□□ -1.97
LSM3P62310 RAB9BP1-201ENST00000519581 626 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AP001207.1-201ENST00000524051 481 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.77□□□□□ -1.97
LSM3P62310 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.77□□□□□ -1.97
LSM3P62310 PARP1P2-201ENST00000556806 195 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AP003117.1-201ENST00000602771 554 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AC013244.1-201ENST00000604279 193 ntBASIC2.77□□□□□ -1.97
LSM3P62310 AL157817.1-201ENST00000614264 790 ntBASIC2.77□□□□□ -1.97
LSM3P62310 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM3P62310 AC021755.1-201ENST00000559747 1447 ntBASIC2.76□□□□□ -1.97
LSM3P62310 RNU4-35P-201ENST00000362588 141 ntBASIC2.76□□□□□ -1.97
LSM3P62310 RNU1-13P-201ENST00000384499 162 ntBASIC2.76□□□□□ -1.97
LSM3P62310 SNORA70C-201ENST00000384538 135 ntBASIC2.76□□□□□ -1.97
LSM3P62310 U8.11-201ENST00000384699 133 ntBASIC2.76□□□□□ -1.97
LSM3P62310 U8.12-201ENST00000384701 133 ntBASIC2.76□□□□□ -1.97
LSM3P62310 RPS4XP9-201ENST00000405151 780 ntBASIC2.76□□□□□ -1.97
LSM3P62310 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 AC007394.1-201ENST00000421941 531 ntBASIC2.76□□□□□ -1.97
LSM3P62310 RPS27AP12-201ENST00000429552 465 ntBASIC2.76□□□□□ -1.97
LSM3P62310 ATP5JP1-201ENST00000431631 322 ntBASIC2.76□□□□□ -1.97
LSM3P62310 VN1R96P-201ENST00000446052 858 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AC069540.1-201ENST00000446320 988 ntBASIC2.76□□□□□ -1.97
LSM3P62310 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LSM3P62310 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM3P62310 U8.18-201ENST00000459285 133 ntBASIC2.76□□□□□ -1.97
LSM3P62310 ACTR3P3-201ENST00000480448 893 ntBASIC2.76□□□□□ -1.97
LSM3P62310 VN1R105P-201ENST00000486595 910 ntBASIC2.76□□□□□ -1.97
LSM3P62310 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM3P62310 LECT2-205ENST00000522943 574 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 AGGF1P6-201ENST00000569213 976 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM3P62310 AC007687.1-201ENST00000602704 304 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AL021707.7-201ENST00000607991 416 ntBASIC2.76□□□□□ -1.97
LSM3P62310 MIR7851-201ENST00000610611 160 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AC005962.2-201ENST00000611427 652 ntBASIC2.76□□□□□ -1.97
LSM3P62310 AL020991.1-201ENST00000612314 373 ntBASIC2.76□□□□□ -1.97
LSM3P62310 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.76□□□□□ -1.97
LSM3P62310 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LSM3P62310 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM3P62310 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM3P62310 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM3P62310 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LSM3P62310 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LSM3P62310 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
LSM3P62310 RPL9P7-201ENST00000330965 580 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms