Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.69□□□□□ -1.66
CLRN1P58418 RPL10P14-201ENST00000565265 298 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 RN7SL708P-201ENST00000580952 299 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 MIR3682-201ENST00000581338 84 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC012417.1-201ENST00000582307 1039 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AL359999.1-201ENST00000604513 294 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 COX6CP4-201ENST00000605798 228 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC018695.5-201ENST00000605872 315 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AP002360.3-201ENST00000607673 710 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC104458.1-201ENST00000608243 463 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC079395.2-201ENST00000610982 737 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 MIR6839-201ENST00000620425 113 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 AC092794.2-201ENST00000620933 563 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 AC010329.2-201ENST00000595195 2737 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
CLRN1P58418 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CLRN1P58418 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLRN1P58418 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 AC097504.1-201ENST00000515103 2415 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 CCT4P2-201ENST00000233836 1548 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
CLRN1P58418 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 MIR589-201ENST00000385238 99 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLRN1P58418 RNA5SP339-201ENST00000390987 122 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 RPS20P2-201ENST00000402520 389 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 RNU4-55P-201ENST00000410731 137 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 RPS3AP9-201ENST00000417027 792 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 RPEP2-201ENST00000432149 701 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 BTF3P10-201ENST00000433415 495 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 MTND4P25-201ENST00000441039 533 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 RPS26P56-201ENST00000444468 240 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.68□□□□□ -1.66
CLRN1P58418 RPL10P17-201ENST00000453852 316 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 TRBV26-201ENST00000456572 344 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC005726.1-201ENST00000494679 427 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 RPL15P21-201ENST00000495592 567 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC019235.1-201ENST00000503847 207 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 KCTD9P5-201ENST00000504141 1170 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC006390.1-201ENST00000508068 283 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 BX510359.5-201ENST00000515651 304 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 RNA5SP362-201ENST00000516048 118 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 RNU6-528P-201ENST00000516926 100 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.68□□□□□ -1.66
CLRN1P58418 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.68□□□□□ -1.66
CLRN1P58418 MIR4504-201ENST00000577413 92 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 MTCYBP13-201ENST00000578634 1093 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 PRPF19P1-201ENST00000584766 898 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC091135.1-201ENST00000585943 307 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 BBIP1P1-201ENST00000602999 279 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC123786.2-201ENST00000603459 275 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC103792.1-201ENST00000603591 919 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AL162431.4-201ENST00000604674 411 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC011626.1-201ENST00000604710 562 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 MLECP1-201ENST00000615893 709 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 AC068722.2-201ENST00000618734 544 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.68□□□□□ -1.66
CLRN1P58418 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.68□□□□□ -1.66
CLRN1P58418 AL049767.1-202ENST00000637826 242 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 RARSP1-201ENST00000542842 1418 ntBASIC4.68□□□□□ -1.66
CLRN1P58418 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLRN1P58418 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLRN1P58418 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms