Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC012170.1-201ENST00000495139 359 ntBASIC4.19□□□□□ -1.74
VCPP55072 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 WBP1LP4-201ENST00000505043 344 ntBASIC4.19□□□□□ -1.74
VCPP55072 AC010468.3-201ENST00000508225 458 ntBASIC4.19□□□□□ -1.74
VCPP55072 AC109458.1-201ENST00000508858 316 ntBASIC4.19□□□□□ -1.74
VCPP55072 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.19□□□□□ -1.74
VCPP55072 RN7SKP289-201ENST00000517244 295 ntBASIC4.19□□□□□ -1.74
VCPP55072 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.19□□□□□ -1.74
VCPP55072 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
VCPP55072 PCNAP1-202ENST00000595299 752 ntBASIC4.19□□□□□ -1.74
VCPP55072 ZNF92P3-201ENST00000596594 954 ntBASIC4.19□□□□□ -1.74
VCPP55072 RPL21P136-201ENST00000605378 396 ntBASIC4.19□□□□□ -1.74
VCPP55072 AP003117.2-201ENST00000606010 545 ntBASIC4.19□□□□□ -1.74
VCPP55072 AP003392.5-201ENST00000607857 415 ntBASIC4.19□□□□□ -1.74
VCPP55072 AL391497.1-201ENST00000608671 547 ntBASIC4.19□□□□□ -1.74
VCPP55072 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VCPP55072 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.19□□□□□ -1.74
VCPP55072 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
VCPP55072 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.19□□□□□ -1.74
VCPP55072 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.19□□□□□ -1.74
VCPP55072 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VCPP55072 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VCPP55072 ZNF90P1-201ENST00000480493 1951 ntBASIC4.18□□□□□ -1.74
VCPP55072 BDP1P-201ENST00000582658 1990 ntBASIC4.18□□□□□ -1.74
VCPP55072 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.18□□□□□ -1.74
VCPP55072 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VCPP55072 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 Y_RNA.110-201ENST00000363220 99 ntBASIC4.18□□□□□ -1.74
VCPP55072 RNU4-31P-201ENST00000384211 141 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC096664.2-201ENST00000411843 406 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC004987.3-201ENST00000413879 771 ntBASIC4.18□□□□□ -1.74
VCPP55072 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VCPP55072 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 AC087650.1-201ENST00000431445 468 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.18□□□□□ -1.74
VCPP55072 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.18□□□□□ -1.74
VCPP55072 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 RPS20P21-201ENST00000466859 343 ntBASIC4.18□□□□□ -1.74
VCPP55072 RN7SKP82-201ENST00000516786 223 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC090136.1-201ENST00000520009 240 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.18□□□□□ -1.74
VCPP55072 GTF2IP8-201ENST00000560687 584 ntBASIC4.18□□□□□ -1.74
VCPP55072 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.18□□□□□ -1.74
VCPP55072 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.18□□□□□ -1.74
VCPP55072 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.18□□□□□ -1.74
VCPP55072 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
VCPP55072 MIR6852-201ENST00000621699 66 ntBASIC4.18□□□□□ -1.74
VCPP55072 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VCPP55072 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VCPP55072 AL079305.1-201ENST00000623159 3008 ntBASIC4.18□□□□□ -1.74
VCPP55072 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
VCPP55072 ZNF833P-201ENST00000424938 1494 ntBASIC4.18□□□□□ -1.74
VCPP55072 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 AC083899.2-201ENST00000423285 1376 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC025125.1-201ENST00000624743 1922 ntBASIC4.17□□□□□ -1.74
VCPP55072 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.17□□□□□ -1.74
VCPP55072 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 MIR1183-201ENST00000408856 89 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.17□□□□□ -1.74
VCPP55072 AL159987.2-201ENST00000432754 307 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC236972.1-201ENST00000433225 199 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC096638.2-201ENST00000434965 711 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL356535.1-201ENST00000440335 398 ntBASIC4.17□□□□□ -1.74
VCPP55072 YWHAQP9-201ENST00000445891 512 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC115115.1-201ENST00000449927 248 ntBASIC4.17□□□□□ -1.74
VCPP55072 FABP3P2-201ENST00000453169 399 ntBASIC4.17□□□□□ -1.74
VCPP55072 CYCSP53-201ENST00000455540 265 ntBASIC4.17□□□□□ -1.74
VCPP55072 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC008481.1-201ENST00000463278 396 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
VCPP55072 AC025459.1-201ENST00000504072 156 ntBASIC4.17□□□□□ -1.74
VCPP55072 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.17□□□□□ -1.74
VCPP55072 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.17□□□□□ -1.74
VCPP55072 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.17□□□□□ -1.74
VCPP55072 MIR2114-201ENST00000516645 80 ntBASIC4.17□□□□□ -1.74
VCPP55072 SNORA76.2-201ENST00000517095 137 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
VCPP55072 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.17□□□□□ -1.74
VCPP55072 PTP4A1P6-201ENST00000531034 478 ntBASIC4.17□□□□□ -1.74
VCPP55072 AP002812.4-201ENST00000532139 286 ntBASIC4.17□□□□□ -1.74
VCPP55072 CYCSP30-201ENST00000546447 172 ntBASIC4.17□□□□□ -1.74
VCPP55072 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.17□□□□□ -1.74
VCPP55072 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.17□□□□□ -1.74
VCPP55072 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.17□□□□□ -1.74
VCPP55072 MRPS35P3-201ENST00000603189 709 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL049634.3-201ENST00000604968 457 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms