Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 OR4C2P-201ENST00000530855 1064 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.29□□□□□ -1.72
LIMK1P53667 LRRC6P1-201ENST00000532188 885 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC100770.1-201ENST00000532310 322 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC007687.1-201ENST00000602704 304 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC073387.2-201ENST00000604797 784 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC018754.1-201ENST00000607486 925 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC093673.2-201ENST00000609674 331 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK1P53667 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 MIR6891-201ENST00000618788 93 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LIMK1P53667 AC010608.2-201ENST00000624830 470 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.29□□□□□ -1.72
LIMK1P53667 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LIMK1P53667 EXOC5P1-201ENST00000510543 1969 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 RLIMP1-201ENST00000339626 1680 ntBASIC4.29□□□□□ -1.72
LIMK1P53667 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
LIMK1P53667 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
LIMK1P53667 Z82217.1-201ENST00000625157 8149 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC011978.2-201ENST00000569835 2054 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LIMK1P53667 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
LIMK1P53667 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 PTP4A1P5-201ENST00000420305 455 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 SKP1P3-201ENST00000429280 487 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 AL512326.1-201ENST00000443050 721 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 RPL9P32-201ENST00000464118 620 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 RPS26P28-201ENST00000470806 348 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC104164.2-201ENST00000496953 495 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC091860.1-201ENST00000505723 432 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AL592156.1-201ENST00000508758 304 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC099522.1-202ENST00000514718 367 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 RN7SKP277-201ENST00000516895 283 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 MYL12AP1-201ENST00000518490 515 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 IGLV3-26-201ENST00000520756 302 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 AP000619.3-201ENST00000535634 1127 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 HSPE1P5-201ENST00000561489 272 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 MIR5685-201ENST00000579080 79 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC002487.1-201ENST00000604565 994 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC099654.9-201ENST00000637055 678 ntBASIC4.28□□□□□ -1.72
LIMK1P53667 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.28□□□□□ -1.72
LIMK1P53667 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
LIMK1P53667 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LIMK1P53667 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.28□□□□□ -1.72
LIMK1P53667 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LIMK1P53667 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 MAPK10-372ENST00000641954 3413 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LIMK1P53667 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LIMK1P53667 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIMK1P53667 MIR93-201ENST00000385024 80 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 Y_RNA.578-201ENST00000390903 88 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 MIR1183-201ENST00000408856 89 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 SNRPFP1-201ENST00000414761 252 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AL139095.3-201ENST00000419672 1203 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 PAICSP7-201ENST00000419829 962 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC114495.1-201ENST00000441274 436 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 RPL23AP33-201ENST00000442301 452 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LIMK1P53667 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 RPS27P23-201ENST00000487608 251 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 RN7SL812P-201ENST00000493791 279 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AP001086.1-201ENST00000494882 321 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms