Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 DHX40P1-201ENST00000588725 1412 ntBASIC4.87□□□□□ -1.63
COPAP53621 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPAP53621 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 AL359922.3-201ENST00000624779 1670 ntBASIC4.86□□□□□ -1.63
COPAP53621 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 RNU6-251P-201ENST00000363235 104 ntBASIC4.86□□□□□ -1.63
COPAP53621 RNU6-553P-201ENST00000364047 96 ntBASIC4.86□□□□□ -1.63
COPAP53621 RNU1-85P-201ENST00000364127 164 ntBASIC4.86□□□□□ -1.63
COPAP53621 P2RY10P2-201ENST00000416730 913 ntBASIC4.86□□□□□ -1.63
COPAP53621 QRSL1P2-201ENST00000418582 964 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC016907.1-201ENST00000419483 435 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 EIF4HP2-201ENST00000424380 563 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC091390.1-201ENST00000433904 331 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC023347.2-201ENST00000433994 462 ntBASIC4.86□□□□□ -1.63
COPAP53621 GSTA7P-201ENST00000438425 448 ntBASIC4.86□□□□□ -1.63
COPAP53621 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC118469.1-201ENST00000442943 488 ntBASIC4.86□□□□□ -1.63
COPAP53621 RPL21P133-201ENST00000443666 476 ntBASIC4.86□□□□□ -1.63
COPAP53621 MTND2P4-201ENST00000445034 1004 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 AL606662.1-201ENST00000445763 553 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC108463.1-201ENST00000450258 347 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC092754.2-201ENST00000463506 460 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC147055.4-201ENST00000504399 745 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 RN7SKP92-201ENST00000517266 244 ntBASIC4.86□□□□□ -1.63
COPAP53621 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 OR5AK1P-201ENST00000524837 922 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 AC133555.2-201ENST00000550213 292 ntBASIC4.86□□□□□ -1.63
COPAP53621 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 AL110118.1-201ENST00000553543 400 ntBASIC4.86□□□□□ -1.63
COPAP53621 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 MIR5699-201ENST00000578903 90 ntBASIC4.86□□□□□ -1.63
COPAP53621 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.86□□□□□ -1.63
COPAP53621 IMMP1LP1-201ENST00000605170 488 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.86□□□□□ -1.63
COPAP53621 AL136981.2-201ENST00000617319 734 ntBASIC4.86□□□□□ -1.63
COPAP53621 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.86□□□□□ -1.63
COPAP53621 AC012414.7-202ENST00000622705 1090 ntBASIC4.86□□□□□ -1.63
COPAP53621 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.86□□□□□ -1.63
COPAP53621 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.86□□□□□ -1.63
COPAP53621 MAPK10-263ENST00000641052 4307 ntBASIC4.86□□□□□ -1.63
COPAP53621 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPAP53621 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPAP53621 OR4K15-201ENST00000305051 1216 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC008549.2-201ENST00000333482 706 ntBASIC4.85□□□□□ -1.63
COPAP53621 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.85□□□□□ -1.63
COPAP53621 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COPAP53621 RNU6-253P-201ENST00000384730 105 ntBASIC4.85□□□□□ -1.63
COPAP53621 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.85□□□□□ -1.63
COPAP53621 TIMM9P2-201ENST00000419324 266 ntBASIC4.85□□□□□ -1.63
COPAP53621 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 RPS27AP7-201ENST00000422792 455 ntBASIC4.85□□□□□ -1.63
COPAP53621 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.85□□□□□ -1.63
COPAP53621 C4BPAP2-201ENST00000428434 478 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 RPL36P19-201ENST00000430744 301 ntBASIC4.85□□□□□ -1.63
COPAP53621 B3GNT2P1-201ENST00000434960 952 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC105402.2-201ENST00000438503 358 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
COPAP53621 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 snoU13.1-201ENST00000459157 104 ntBASIC4.85□□□□□ -1.63
COPAP53621 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.85□□□□□ -1.63
COPAP53621 AC093281.2-201ENST00000510153 597 ntBASIC4.85□□□□□ -1.63
COPAP53621 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 Y_RNA.719-201ENST00000517156 106 ntBASIC4.85□□□□□ -1.63
COPAP53621 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
COPAP53621 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.85□□□□□ -1.63
COPAP53621 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms