Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NUP98P52948 RNU6-249P-201ENST00000363016 102 ntBASIC3.84□□□□□ -1.79
NUP98P52948 SNORA5B-201ENST00000363786 132 ntBASIC3.84□□□□□ -1.79
NUP98P52948 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NUP98P52948 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.84□□□□□ -1.79
NUP98P52948 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP98P52948 SETP5-201ENST00000437270 562 ntBASIC3.84□□□□□ -1.79
NUP98P52948 VN1R104P-201ENST00000505115 1009 ntBASIC3.84□□□□□ -1.79
NUP98P52948 AP001207.2-201ENST00000519490 539 ntBASIC3.84□□□□□ -1.79
NUP98P52948 AL390334.1-201ENST00000556395 450 ntBASIC3.84□□□□□ -1.79
NUP98P52948 TGIF1P1-201ENST00000558095 802 ntBASIC3.84□□□□□ -1.79
NUP98P52948 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.84□□□□□ -1.79
NUP98P52948 MIR4425-201ENST00000580572 84 ntBASIC3.84□□□□□ -1.79
NUP98P52948 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.84□□□□□ -1.79
NUP98P52948 ATP1B3P1-201ENST00000605365 821 ntBASIC3.84□□□□□ -1.79
NUP98P52948 AC019080.5-201ENST00000624891 757 ntBASIC3.84□□□□□ -1.79
NUP98P52948 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
NUP98P52948 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.84□□□□□ -1.8
NUP98P52948 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
NUP98P52948 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
NUP98P52948 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.8
NUP98P52948 AL356489.2-201ENST00000566968 3528 ntBASIC3.84□□□□□ -1.8
NUP98P52948 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
NUP98P52948 RNU6-1279P-201ENST00000383917 103 ntBASIC3.84□□□□□ -1.8
NUP98P52948 SNORD15B-201ENST00000384714 146 ntBASIC3.84□□□□□ -1.8
NUP98P52948 RPL7P8-201ENST00000411964 730 ntBASIC3.84□□□□□ -1.8
NUP98P52948 AL592148.1-201ENST00000413568 445 ntBASIC3.84□□□□□ -1.8
NUP98P52948 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NUP98P52948 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.84□□□□□ -1.8
NUP98P52948 ELOCP23-201ENST00000452014 332 ntBASIC3.84□□□□□ -1.8
NUP98P52948 RPL21P8-201ENST00000465083 535 ntBASIC3.84□□□□□ -1.8
NUP98P52948 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NUP98P52948 HMGB1P3-201ENST00000502802 616 ntBASIC3.84□□□□□ -1.8
NUP98P52948 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.84□□□□□ -1.8
NUP98P52948 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.84□□□□□ -1.8
NUP98P52948 VN1R90P-201ENST00000595717 726 ntBASIC3.84□□□□□ -1.8
NUP98P52948 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.84□□□□□ -1.8
NUP98P52948 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUP98P52948 AC087190.4-201ENST00000574616 8334 ntBASIC3.83□□□□□ -1.8
NUP98P52948 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
NUP98P52948 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.83□□□□□ -1.8
NUP98P52948 RPL7P25-201ENST00000404151 721 ntBASIC3.83□□□□□ -1.8
NUP98P52948 AL353692.2-201ENST00000407054 335 ntBASIC3.83□□□□□ -1.8
NUP98P52948 NUP35P1-201ENST00000422734 947 ntBASIC3.83□□□□□ -1.8
NUP98P52948 USP9YP36-201ENST00000424581 829 ntBASIC3.83□□□□□ -1.8
NUP98P52948 USP9YP31-201ENST00000431405 881 ntBASIC3.83□□□□□ -1.8
NUP98P52948 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.83□□□□□ -1.8
NUP98P52948 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.83□□□□□ -1.8
NUP98P52948 AC016696.1-201ENST00000446949 318 ntBASIC3.83□□□□□ -1.8
NUP98P52948 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.83□□□□□ -1.8
NUP98P52948 AL133477.1-201ENST00000457472 514 ntBASIC3.83□□□□□ -1.8
NUP98P52948 PRDX3P4-201ENST00000470828 747 ntBASIC3.83□□□□□ -1.8
NUP98P52948 S100A11P1-201ENST00000477525 312 ntBASIC3.83□□□□□ -1.8
NUP98P52948 RFPL4AP5-201ENST00000514977 504 ntBASIC3.83□□□□□ -1.8
NUP98P52948 AC024023.1-201ENST00000624530 922 ntBASIC3.83□□□□□ -1.8
NUP98P52948 AC139713.2-210ENST00000641741 992 ntBASIC3.83□□□□□ -1.8
NUP98P52948 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUP98P52948 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUP98P52948 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.83□□□□□ -1.8
NUP98P52948 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP98P52948 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NUP98P52948 RNA5SP184-201ENST00000411071 108 ntBASIC3.82□□□□□ -1.8
NUP98P52948 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.82□□□□□ -1.8
NUP98P52948 FAR1P1-201ENST00000427163 934 ntBASIC3.82□□□□□ -1.8
NUP98P52948 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.82□□□□□ -1.8
NUP98P52948 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP98P52948 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP98P52948 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.82□□□□□ -1.8
NUP98P52948 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NUP98P52948 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NUP98P52948 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
NUP98P52948 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP98P52948 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 AL031679.1-201ENST00000400616 525 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP98P52948 HMGB3P11-201ENST00000440127 604 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AC005002.1-201ENST00000447458 540 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP98P52948 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP98P52948 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP98P52948 AC034159.1-201ENST00000513885 583 ntBASIC3.81□□□□□ -1.8
NUP98P52948 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AC135001.1-201ENST00000544546 283 ntBASIC3.81□□□□□ -1.8
NUP98P52948 DPRXP4-201ENST00000578053 568 ntBASIC3.81□□□□□ -1.8
NUP98P52948 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP98P52948 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NUP98P52948 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NUP98P52948 NR1H5P-201ENST00000452683 1377 ntBASIC3.81□□□□□ -1.8
NUP98P52948 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP98P52948 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms