Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
MRE11P49959 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
MRE11P49959 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MRE11P49959 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MRE11P49959 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
MRE11P49959 AL592182.3-201ENST00000642132 3304 ntBASIC5.59□□□□□ -1.51
MRE11P49959 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
MRE11P49959 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.59□□□□□ -1.51
MRE11P49959 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
MRE11P49959 MTND4P31-201ENST00000425607 1343 ntBASIC5.59□□□□□ -1.51
MRE11P49959 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 RNA5SP515-201ENST00000364570 118 ntBASIC5.59□□□□□ -1.51
MRE11P49959 SNORA70.4-201ENST00000365509 134 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC025750.1-201ENST00000399891 379 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC007899.1-201ENST00000412776 775 ntBASIC5.59□□□□□ -1.51
MRE11P49959 OR2AM1P-201ENST00000422137 422 ntBASIC5.59□□□□□ -1.51
MRE11P49959 RPL7P44-201ENST00000424827 742 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 RPL23AP4-201ENST00000427757 463 ntBASIC5.59□□□□□ -1.51
MRE11P49959 MTCO1P52-201ENST00000433928 531 ntBASIC5.59□□□□□ -1.51
MRE11P49959 USP9YP35-201ENST00000435696 412 ntBASIC5.59□□□□□ -1.51
MRE11P49959 ARL5AP2-201ENST00000444698 533 ntBASIC5.59□□□□□ -1.51
MRE11P49959 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.59□□□□□ -1.51
MRE11P49959 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 SNORA84-201ENST00000459229 133 ntBASIC5.59□□□□□ -1.51
MRE11P49959 PPIAP21-201ENST00000464473 501 ntBASIC5.59□□□□□ -1.51
MRE11P49959 RPL5P30-201ENST00000465511 891 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC083829.1-201ENST00000503756 657 ntBASIC5.59□□□□□ -1.51
MRE11P49959 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.59□□□□□ -1.51
MRE11P49959 snoU109.6-201ENST00000516831 118 ntBASIC5.59□□□□□ -1.51
MRE11P49959 DUXAP2-201ENST00000519198 589 ntBASIC5.59□□□□□ -1.51
MRE11P49959 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
MRE11P49959 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 AC069240.1-201ENST00000548774 375 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.59□□□□□ -1.51
MRE11P49959 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 AC245505.1-201ENST00000556398 224 ntBASIC5.59□□□□□ -1.51
MRE11P49959 NIFKP8-201ENST00000560500 874 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.59□□□□□ -1.51
MRE11P49959 AC019193.2-201ENST00000610012 634 ntBASIC5.59□□□□□ -1.51
MRE11P49959 MIR6780A-201ENST00000615089 68 ntBASIC5.59□□□□□ -1.51
MRE11P49959 AL136981.2-201ENST00000617319 734 ntBASIC5.59□□□□□ -1.51
MRE11P49959 OR52H1-202ENST00000641796 1061 ntBASIC5.59□□□□□ -1.51
MRE11P49959 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MRE11P49959 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
MRE11P49959 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.58□□□□□ -1.52
MRE11P49959 MTCO1P6-201ENST00000481192 1384 ntBASIC5.58□□□□□ -1.52
MRE11P49959 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MRE11P49959 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MRE11P49959 U3.3-201ENST00000362986 216 ntBASIC5.58□□□□□ -1.52
MRE11P49959 RNU6-1283P-201ENST00000365314 105 ntBASIC5.58□□□□□ -1.52
MRE11P49959 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 SNORA37-201ENST00000384504 129 ntBASIC5.58□□□□□ -1.52
MRE11P49959 RNU6-253P-201ENST00000384730 105 ntBASIC5.58□□□□□ -1.52
MRE11P49959 MIR525-201ENST00000384978 85 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AL133264.1-201ENST00000407157 562 ntBASIC5.58□□□□□ -1.52
MRE11P49959 GSTM3P2-201ENST00000412746 530 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AC105402.1-201ENST00000413336 545 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AC009302.1-201ENST00000417147 390 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 MRPS36P1-201ENST00000421291 307 ntBASIC5.58□□□□□ -1.52
MRE11P49959 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 MTND4P25-201ENST00000441039 533 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 ZNF114P1-201ENST00000453500 292 ntBASIC5.58□□□□□ -1.52
MRE11P49959 RFC5P1-201ENST00000454419 874 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.58□□□□□ -1.52
MRE11P49959 RPL5P24-201ENST00000463742 885 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 GAPDHP39-201ENST00000481866 979 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 SMARCE1P4-201ENST00000523647 241 ntBASIC5.58□□□□□ -1.52
MRE11P49959 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 AP001317.1-201ENST00000531194 960 ntBASIC5.58□□□□□ -1.52
MRE11P49959 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms