Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MTCO3P27-201ENST00000514397 196 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 PAICSP4-201ENST00000517543 1253 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 IGKV2D-19-201ENST00000523346 262 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AP000916.1-201ENST00000533869 835 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.23□□□□□ -1.73
NEDD4P46934 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 AC006077.1-201ENST00000604746 343 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 RMST_10.1-201ENST00000616309 154 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AP003476.1-201ENST00000623984 516 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AC009093.8-201ENST00000641769 292 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.23□□□□□ -1.73
NEDD4P46934 AC093311.1-201ENST00000506586 2021 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 HSPA8P1-201ENST00000425843 1833 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 AC090337.1-201ENST00000579651 2074 ntBASIC4.23□□□□□ -1.73
NEDD4P46934 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NEDD4P46934 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.23□□□□□ -1.73
NEDD4P46934 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 RNA5SP502-201ENST00000362694 119 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AC023128.2-201ENST00000420880 1223 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 CYCSP4-201ENST00000429682 331 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 ETF1P3-201ENST00000430422 1160 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 RPL37P1-201ENST00000432310 284 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AC006994.1-201ENST00000438212 839 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD4P46934 AL353093.1-201ENST00000441292 436 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 RNF2P1-201ENST00000442955 1010 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD4P46934 HMGN1P5-201ENST00000448591 263 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 NPM1P39-201ENST00000449818 867 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD4P46934 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 MTCO3P16-201ENST00000454456 754 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD4P46934 AC010307.1-201ENST00000467206 836 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 RPS17P11-201ENST00000474297 293 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 AP002812.1-201ENST00000495378 474 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD4P46934 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.22□□□□□ -1.73
NEDD4P46934 OR5AP1P-201ENST00000529730 940 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 MIR548Y-201ENST00000582739 110 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AC124856.1-201ENST00000600819 896 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 AC024933.1-201ENST00000608472 348 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.22□□□□□ -1.73
NEDD4P46934 U4.6-201ENST00000621618 127 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 OR8B1P-202ENST00000641132 1178 ntBASIC4.22□□□□□ -1.73
NEDD4P46934 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
NEDD4P46934 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NEDD4P46934 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NEDD4P46934 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
NEDD4P46934 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEDD4P46934 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NEDD4P46934 RNU6-354P-201ENST00000383862 107 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 RNU6-610P-201ENST00000384264 107 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 RNU6-1005P-201ENST00000384519 107 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 SNORA48.7-201ENST00000391302 135 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 RHEBP3-201ENST00000411920 351 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 AC069157.1-201ENST00000421749 137 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.21□□□□□ -1.73
NEDD4P46934 AC013262.1-201ENST00000426710 252 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NEDD4P46934 AC093422.3-201ENST00000428506 305 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 MTCO3P21-201ENST00000430791 643 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 HMGN2P31-201ENST00000432430 273 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.21□□□□□ -1.73
NEDD4P46934 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.73
NEDD4P46934 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.21□□□□□ -1.73
NEDD4P46934 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.21□□□□□ -1.73
NEDD4P46934 FTH1P24-201ENST00000503502 462 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 AC108471.1-201ENST00000513977 287 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 snoU109.6-201ENST00000516831 118 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.21□□□□□ -1.73
NEDD4P46934 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.21□□□□□ -1.73
NEDD4P46934 AC022884.3-201ENST00000579571 248 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 AC126365.2-201ENST00000580630 379 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.21□□□□□ -1.73
NEDD4P46934 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.21□□□□□ -1.73
NEDD4P46934 OR2BH1P-201ENST00000608850 864 ntBASIC4.21□□□□□ -1.73
NEDD4P46934 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.21□□□□□ -1.73
NEDD4P46934 VN1R9P-201ENST00000614184 867 ntBASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms