Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.73□□□□□ -1.81
TNFSF9P41273 AC106785.3-201ENST00000564064 847 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 MIR3200-201ENST00000580767 85 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFSF9P41273 OR6R2P-201ENST00000609216 300 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 MIR7973-1-201ENST00000614683 76 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 RMST_9.1-201ENST00000619945 193 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFSF9P41273 AC244205.2-202ENST00000635781 342 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC073346.2-201ENST00000624724 2058 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 MTND5P1-201ENST00000445440 1375 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC007342.9-201ENST00000623877 1385 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFSF9P41273 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFSF9P41273 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TNFSF9P41273 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 RNF6P1-201ENST00000444889 1784 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 CEP170P1-201ENST00000502249 4587 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TNFSF9P41273 OR52E6-202ENST00000379946 954 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AL136116.1-201ENST00000403591 381 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 RSL24D1P1-201ENST00000404972 493 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC008280.1-201ENST00000418851 412 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AL160175.1-201ENST00000428124 247 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 TPTE2P1-204ENST00000435256 593 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF9P41273 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF9P41273 RPL21P10-201ENST00000463521 490 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AP000563.1-201ENST00000490865 758 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC093663.1-201ENST00000497190 394 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF9P41273 HSPD1P15-201ENST00000505573 1122 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC026427.2-201ENST00000506228 536 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFSF9P41273 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AL161713.1-201ENST00000555538 145 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF9P41273 ABI1P1-201ENST00000603375 1120 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF9P41273 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AP004607.9-201ENST00000618202 316 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFSF9P41273 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF9P41273 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF9P41273 AL356274.2-201ENST00000624379 3752 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
TNFSF9P41273 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
TNFSF9P41273 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 DDX6P1-205ENST00000441966 1436 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 HSPA8P19-201ENST00000505359 1517 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC032011.1-201ENST00000611703 1549 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF9P41273 GCNT6-201ENST00000379591 934 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 MIR708-201ENST00000390708 88 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 Z99755.1-201ENST00000414048 380 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF9P41273 MED6P1-201ENST00000439659 713 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 RPL34P26-201ENST00000445636 354 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 SUMO1P1-201ENST00000497904 306 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC093770.1-201ENST00000511559 571 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 SNORA74D-201ENST00000516404 141 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 RNU6-551P-201ENST00000516661 103 ntBASIC3.71□□□□□ -1.82
TNFSF9P41273 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFSF9P41273 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF9P41273 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF9P41273 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF9P41273 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms