Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU1-85P-201ENST00000364127 164 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 RNU6-374P-201ENST00000364146 108 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 TMSB4XP8-201ENST00000402089 135 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 HMGB3P19-201ENST00000403971 560 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.14□□□□□ -1.75
HNF4AP41235 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 AC096533.1-201ENST00000411645 353 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 NRBF2P2-201ENST00000413087 861 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 TMSB4XP6-201ENST00000415187 135 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 MTND2P16-201ENST00000419987 799 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 TMSB4XP1-201ENST00000424567 135 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 RPS29P17-201ENST00000430795 166 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC073143.1-201ENST00000436316 395 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 AC044797.1-201ENST00000445744 679 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AL050341.1-201ENST00000447743 313 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 OR51B8P-201ENST00000449892 769 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 Z99714.1-201ENST00000450463 807 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.14□□□□□ -1.75
HNF4AP41235 RPL23AP81-201ENST00000455252 467 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 SYPL1P1-201ENST00000473622 768 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.14□□□□□ -1.75
HNF4AP41235 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 AC119751.1-201ENST00000513357 765 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 RN7SKP116-201ENST00000516902 319 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 OR5M7P-201ENST00000526140 972 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.14□□□□□ -1.75
HNF4AP41235 OR4A45P-201ENST00000529954 901 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC009643.1-201ENST00000532030 391 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 MTCO1P40-201ENST00000574371 625 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.14□□□□□ -1.75
HNF4AP41235 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HNF4AP41235 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.14□□□□□ -1.75
HNF4AP41235 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 AL031666.3-201ENST00000609320 1006 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 MIR4727-201ENST00000622232 55 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.14□□□□□ -1.75
HNF4AP41235 AC011944.2-201ENST00000624440 683 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 AP001486.2-201ENST00000561652 5113 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HNF4AP41235 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HNF4AP41235 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 MTCO3P31-201ENST00000405526 789 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AL355615.1-201ENST00000406187 641 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 MIR1179-201ENST00000408703 91 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 VN1R51P-201ENST00000411675 945 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 ELOCP19-201ENST00000411919 318 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 P2RY10P2-201ENST00000416730 913 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AL807761.1-201ENST00000417622 171 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.13□□□□□ -1.75
HNF4AP41235 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.13□□□□□ -1.75
HNF4AP41235 BNIP3P41-201ENST00000503774 571 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 AC021451.1-201ENST00000523498 1129 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AP001207.1-201ENST00000524051 481 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 OR7E13P-201ENST00000526052 910 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 MTCYBP41-201ENST00000528913 1123 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC118942.1-201ENST00000529674 1035 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 OR4C2P-201ENST00000530855 1064 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC087894.1-201ENST00000538359 518 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.13□□□□□ -1.75
HNF4AP41235 CYP2C60P-201ENST00000566088 139 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 MIR5096-201ENST00000583713 70 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 BNIP3P38-201ENST00000601117 544 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC119501.1-201ENST00000603646 475 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC113368.1-201ENST00000603736 382 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AL356218.2-201ENST00000605264 187 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 AC013244.3-201ENST00000605614 388 ntBASIC4.13□□□□□ -1.75
HNF4AP41235 MIR432-201ENST00000606207 94 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms