Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRIM23P36406 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 AC025125.1-201ENST00000624743 1922 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 NSRP1P1-201ENST00000444067 1693 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM23P36406 RNU6-354P-201ENST00000383862 107 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RNU6-468P-201ENST00000384003 109 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RNU6-610P-201ENST00000384264 107 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM23P36406 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RPL7P2-201ENST00000427639 268 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC083863.1-201ENST00000438811 231 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RPS29P7-201ENST00000439662 171 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RRM2P4-201ENST00000441721 562 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM23P36406 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM23P36406 OR9M1P-201ENST00000459641 921 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 RPS17P11-201ENST00000474297 293 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC091959.2-201ENST00000477363 321 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM23P36406 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC005351.1-201ENST00000511152 786 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 RNU5A-7P-201ENST00000515979 116 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 IGKV2-38-201ENST00000517443 247 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 HSPE1P5-201ENST00000561489 272 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC034105.4-201ENST00000568304 277 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM23P36406 AC006116.7-201ENST00000590141 756 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM23P36406 AL391261.4-201ENST00000616012 481 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM23P36406 AP003400.6-201ENST00000624698 740 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 AL590396.2-201ENST00000636511 1041 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM23P36406 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM23P36406 Z82217.1-201ENST00000625157 8149 ntBASIC3.92□□□□□ -1.78
TRIM23P36406 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM23P36406 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM23P36406 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
TRIM23P36406 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM23P36406 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM23P36406 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM23P36406 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM23P36406 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM23P36406 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
TRIM23P36406 RNA5SP167-201ENST00000365461 116 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM23P36406 RN7SKP202-201ENST00000410439 330 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC004987.3-201ENST00000413879 771 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM23P36406 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 NPM1P34-201ENST00000428821 893 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 ELOCP6-201ENST00000429066 328 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 HIGD1AP4-201ENST00000430194 280 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 RPL37P1-201ENST00000432310 284 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC044797.1-201ENST00000445744 679 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM23P36406 ELOCP12-201ENST00000458706 328 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM23P36406 TMED11P-201ENST00000479478 690 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 SNX5P1-201ENST00000505757 1041 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC104108.1-201ENST00000509930 412 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AC008494.2-201ENST00000514544 370 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC112206.4-201ENST00000515142 405 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM23P36406 AC139103.1-201ENST00000534696 1030 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 CYCSP30-201ENST00000546447 172 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM23P36406 AL360157.1-201ENST00000565962 87 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 MIR5685-201ENST00000579080 79 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 MIR5047-201ENST00000579212 100 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM23P36406 AP002906.1-201ENST00000603405 233 ntBASIC3.91□□□□□ -1.78
TRIM23P36406 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM23P36406 MIR6864-201ENST00000617935 70 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms