Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXD13P35453 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 AC012020.1-201ENST00000624541 1728 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 MTND5P3-201ENST00000438536 1800 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 MIR448-201ENST00000362131 111 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 AL449283.1-202ENST00000418249 604 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 RPL23AP38-201ENST00000423801 469 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 Z93242.1-201ENST00000427102 353 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXD13P35453 RPL23AP33-201ENST00000442301 452 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXD13P35453 AL031313.1-201ENST00000448435 256 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AL645939.1-201ENST00000453429 797 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 AC104164.3-201ENST00000467363 1258 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 TPT1P8-201ENST00000510120 555 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 OR6C73P-201ENST00000546432 358 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 MIR5684-201ENST00000585074 65 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD13P35453 AL590392.1-201ENST00000604960 446 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC026368.1-201ENST00000614934 690 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 AC026634.1-201ENST00000634369 198 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD13P35453 AC016588.2-201ENST00000632484 3021 ntBASIC4.49□□□□□ -1.69
HOXD13P35453 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HOXD13P35453 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD13P35453 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXD13P35453 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HOXD13P35453 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD13P35453 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD13P35453 RNA5SP502-201ENST00000362694 119 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RNU6-492P-201ENST00000363035 104 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RNA5SP513-201ENST00000364648 118 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 RNU6-1226P-201ENST00000384317 107 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RNU6-921P-201ENST00000384361 107 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 MIR217-201ENST00000384817 110 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 MIR93-201ENST00000385024 80 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RNU6-1300P-201ENST00000391046 108 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 TPT1P2-201ENST00000413105 503 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 MTND4P22-201ENST00000413116 1169 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD13P35453 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 CKS1BP5-201ENST00000434172 273 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RPL23AP46-201ENST00000438548 490 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 AL034418.1-201ENST00000448675 860 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC133473.1-201ENST00000455173 299 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 RPL36AP13-201ENST00000457490 317 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 PNPLA4P1-201ENST00000458328 305 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 AC018635.1-201ENST00000468292 1030 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXD13P35453 RN7SL604P-201ENST00000492589 296 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 IGKV2-38-201ENST00000517443 247 ntBASIC4.48□□□□□ -1.69
HOXD13P35453 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXD13P35453 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXD13P35453 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD13P35453 AC012417.1-201ENST00000582307 1039 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms