Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC091544.4-201ENST00000555268 342 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 AP005262.1-201ENST00000582646 997 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 AC231759.1-201ENST00000616455 597 ntBASIC3.71□□□□□ -1.82
COL4A5P29400 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A5P29400 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A5P29400 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A5P29400 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A5P29400 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A5P29400 AC000403.1-201ENST00000613696 3585 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.7□□□□□ -1.82
COL4A5P29400 YWHAEP5-201ENST00000431545 765 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.7□□□□□ -1.82
COL4A5P29400 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A5P29400 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.7□□□□□ -1.82
COL4A5P29400 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 RNU1-41P-201ENST00000516161 162 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 RNU1-48P-201ENST00000516400 162 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A5P29400 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A5P29400 AC009948.4-201ENST00000604692 675 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.7□□□□□ -1.82
COL4A5P29400 AC104446.1-201ENST00000613728 1321 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A5P29400 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.7□□□□□ -1.82
COL4A5P29400 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A5P29400 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
COL4A5P29400 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A5P29400 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.69□□□□□ -1.82
COL4A5P29400 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL4A5P29400 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A5P29400 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 AC017078.1-201ENST00000416146 368 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AL139413.1-201ENST00000421309 217 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A5P29400 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.69□□□□□ -1.82
COL4A5P29400 Z93242.1-201ENST00000427102 353 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 ZYG11AP1-201ENST00000430329 837 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A5P29400 MTND2P25-201ENST00000449028 610 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AC112492.1-201ENST00000449607 712 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AC010469.1-201ENST00000463864 576 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A5P29400 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A5P29400 AC093755.1-201ENST00000512950 1023 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.69□□□□□ -1.82
COL4A5P29400 RFPL4AP3-201ENST00000515267 345 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.69□□□□□ -1.82
COL4A5P29400 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.69□□□□□ -1.82
COL4A5P29400 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.69□□□□□ -1.82
COL4A5P29400 RPL23AP92-201ENST00000603609 255 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AC074276.2-201ENST00000619891 348 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AL596275.2-204ENST00000641628 552 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 AL596275.2-206ENST00000641957 626 ntBASIC3.69□□□□□ -1.82
COL4A5P29400 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
COL4A5P29400 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
COL4A5P29400 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A5P29400 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 AL132656.3-201ENST00000606384 1595 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.68□□□□□ -1.82
COL4A5P29400 AL513174.1-201ENST00000423182 629 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AC022018.1-201ENST00000430685 241 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AC092447.2-201ENST00000435487 669 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.68□□□□□ -1.82
COL4A5P29400 MRPS31P2-201ENST00000451581 518 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 RPL23AP71-201ENST00000470966 469 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 TRBV8-2-201ENST00000475637 270 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.68□□□□□ -1.82
COL4A5P29400 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.68□□□□□ -1.82
COL4A5P29400 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 MIR4769-201ENST00000584126 77 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 ELOCP29-201ENST00000588193 334 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL4A5P29400 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 AL035407.1-201ENST00000429211 571 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 PRDX3P4-201ENST00000470828 747 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 RPL7P47-201ENST00000497299 556 ntBASIC3.68□□□□□ -1.82
COL4A5P29400 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.68□□□□□ -1.82
COL4A5P29400 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A5P29400 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
COL4A5P29400 CYCSP41-201ENST00000616920 296 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms