Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MTND5P3-201ENST00000438536 1800 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 AL512646.1-201ENST00000269395 1077 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 RNU6-543P-201ENST00000362576 108 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AL359837.1-201ENST00000381357 287 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 MIR525-201ENST00000384978 85 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 RPL21P65-201ENST00000406094 466 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 RN7SKP202-201ENST00000410439 330 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC127526.1-201ENST00000417526 366 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTPN4P29074 RPL7P2-201ENST00000427639 268 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN4P29074 FABP5P3-201ENST00000437960 408 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC002542.1-201ENST00000440683 193 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 Z95327.1-201ENST00000446082 482 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 CYCSP20-201ENST00000473154 315 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 RN7SL271P-201ENST00000487601 295 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 RN7SL604P-201ENST00000492589 296 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC121161.1-201ENST00000510606 652 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPN4P29074 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN4P29074 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTPN4P29074 SERPINE4P-201ENST00000554978 281 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC022968.1-201ENST00000567372 442 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN4P29074 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC096586.1-201ENST00000610267 561 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 MIR6875-201ENST00000617506 72 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 AC093875.1-201ENST00000623688 504 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 MTCO1P6-201ENST00000481192 1384 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 Z82217.1-201ENST00000625157 8149 ntBASIC3.96□□□□□ -1.78
PTPN4P29074 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
PTPN4P29074 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PTPN4P29074 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PTPN4P29074 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN4P29074 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PTPN4P29074 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 ATF1P1-201ENST00000406040 927 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 UBE2D3P3-201ENST00000426992 425 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN4P29074 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 TVP23BP2-201ENST00000455082 615 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 RNA5SP246-201ENST00000458909 119 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AP000873.1-201ENST00000463987 400 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN4P29074 RN7SL132P-201ENST00000478131 296 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN4P29074 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC023141.12-201ENST00000512399 199 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC093755.1-201ENST00000512950 1023 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 IGHV3-32-201ENST00000519182 355 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN4P29074 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC091515.1-201ENST00000548110 679 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN4P29074 CR383656.14-201ENST00000551951 406 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.95□□□□□ -1.78
PTPN4P29074 RPL23AP87-202ENST00000573039 466 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC090079.2-201ENST00000575289 768 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC012417.1-201ENST00000582307 1039 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC053481.4-201ENST00000583164 216 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN4P29074 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC244505.7-201ENST00000599675 272 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AL359535.1-201ENST00000612100 1087 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 uc_338.32-201ENST00000615087 172 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC090246.1-201ENST00000616499 426 ntBASIC3.95□□□□□ -1.78
PTPN4P29074 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN4P29074 AC020978.9-201ENST00000624380 1141 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms