Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MRPS31P2-201ENST00000451581 518 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 TRBV8-2-201ENST00000475637 270 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 RPL21P103-201ENST00000479921 488 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC078817.1-201ENST00000492623 435 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 FCF1P3-201ENST00000496394 590 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC108120.2-201ENST00000512973 294 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 RNU6-1004P-201ENST00000516584 111 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC067904.2-201ENST00000517322 1283 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 NDUFB9P3-201ENST00000521269 501 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC138473.1-201ENST00000605717 526 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC005972.3-201ENST00000606304 481 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AL121772.2-201ENST00000614331 297 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC039056.2-201ENST00000622261 511 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 SNORA50A-202ENST00000629536 136 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AP000553.6-201ENST00000641242 118 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AL732372.2-225ENST00000642124 456 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMBP28068 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC091152.2-201ENST00000591628 2569 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 RPL26P37-201ENST00000411983 438 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 AL389915.1-201ENST00000422463 466 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMBP28068 ELOCP6-201ENST00000429066 328 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 NEK4P1-201ENST00000433383 879 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMBP28068 ELOCP12-201ENST00000458706 328 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC104629.2-201ENST00000468627 598 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 AP002884.2-201ENST00000471647 395 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 CYCSP20-201ENST00000473154 315 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC007991.1-201ENST00000522680 631 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 UBE2NP1-201ENST00000545592 458 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC006077.1-201ENST00000604746 343 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 RNA5SP108-201ENST00000605921 117 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC015726.3-201ENST00000624501 418 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 OR8B1P-202ENST00000641132 1178 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DMBP28068 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
HLA-DMBP28068 AC010733.2-201ENST00000589496 5702 ntBASIC2.73□□□□□ -1.97
HLA-DMBP28068 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DMBP28068 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DMBP28068 RNA5SP124-201ENST00000362739 110 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 RAB9AP3-201ENST00000412737 573 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC069157.1-201ENST00000421749 137 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC006989.1-201ENST00000427212 131 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AL158071.1-201ENST00000430315 461 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 NDUFA5P10-201ENST00000432147 357 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AL031663.1-201ENST00000437445 219 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 AL138799.3-201ENST00000438968 350 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 ARL5AP3-201ENST00000439327 386 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 HMGN2P21-201ENST00000447764 270 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC010655.1-201ENST00000449336 292 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 RAB9AP1-201ENST00000449393 573 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 HMGB3P30-201ENST00000457863 606 ntBASIC2.72□□□□□ -1.97
HLA-DMBP28068 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DMBP28068 AL845331.3-202ENST00000562856 261 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms