Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 RNA5SP42-201ENST00000364278 115 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 OR6K3-202ENST00000368146 996 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 RNU6-146P-201ENST00000384602 108 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 MIR7-1-201ENST00000384871 110 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 U3.39-201ENST00000408569 239 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 BX323014.1-201ENST00000412876 237 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 RPL30P2-201ENST00000414021 291 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AC009237.5-201ENST00000414271 501 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 HSFY4P-201ENST00000415994 1181 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC073464.3-201ENST00000422564 712 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 FAM204CP-201ENST00000424489 642 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 MTCO1P45-201ENST00000431457 267 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 MRPS18BP2-201ENST00000434310 759 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 RPS29P31-201ENST00000446147 164 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 MTND3P4-201ENST00000453537 303 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 AL136097.1-201ENST00000456945 913 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AC023598.1-201ENST00000472521 361 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AC084357.1-201ENST00000473404 255 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 SETP14-201ENST00000497538 873 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC117525.1-201ENST00000515228 503 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.94□□□□□ -1.94
COL8A2P25067 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A2P25067 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 MTCO2P22-201ENST00000603246 681 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AL161756.2-201ENST00000604597 246 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 BX322635.1-201ENST00000605804 496 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.94□□□□□ -1.94
COL8A2P25067 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AL391834.1-201ENST00000609609 560 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 AL645937.1-201ENST00000641739 1652 ntBASIC2.94□□□□□ -1.94
COL8A2P25067 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL8A2P25067 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A2P25067 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.94□□□□□ -1.94
COL8A2P25067 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A2P25067 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
COL8A2P25067 MTND5P1-201ENST00000445440 1375 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 OR5T3-201ENST00000303059 1023 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RNU6-670P-201ENST00000364312 104 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 SNORD6-201ENST00000365444 73 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RNU6-328P-201ENST00000390887 106 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.93□□□□□ -1.94
COL8A2P25067 OR1AA1P-201ENST00000419597 916 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 PTP4A1P5-201ENST00000420305 455 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AC074367.1-201ENST00000438685 1125 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.93□□□□□ -1.94
COL8A2P25067 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 RNU6-1218P-201ENST00000458990 108 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RNU7-170P-201ENST00000459303 61 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RPL23AP73-201ENST00000492507 471 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.93□□□□□ -1.94
COL8A2P25067 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 RNU2-27P-201ENST00000516185 142 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 RNU6-1231P-201ENST00000517185 103 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 SMARCE1P4-201ENST00000523647 241 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.93□□□□□ -1.94
COL8A2P25067 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.93□□□□□ -1.94
COL8A2P25067 MIR4738-201ENST00000579134 87 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.93□□□□□ -1.94
COL8A2P25067 AC103710.3-201ENST00000608157 948 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.93□□□□□ -1.94
COL8A2P25067 AL118508.4-201ENST00000624142 1176 ntBASIC2.93□□□□□ -1.94
COL8A2P25067 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A2P25067 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms