Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 RNA5SP443-201ENST00000363083 132 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 RNA5SP223-201ENST00000365174 120 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 RNU6-1207P-201ENST00000384343 107 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 ENSAP1-201ENST00000392855 326 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 DUTP5-201ENST00000406790 469 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MTND1P21-201ENST00000412991 285 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MTND4LP10-201ENST00000435146 291 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC3P19447 OR7E125P-201ENST00000443450 846 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 IGHV5-78-201ENST00000450948 295 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC091685.2-201ENST00000454924 864 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 RPS4XP10-201ENST00000465034 731 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 RN7SL97P-201ENST00000486780 299 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 MED28P5-201ENST00000528254 438 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MTCYBP41-201ENST00000528913 1123 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC3P19447 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC3P19447 TPRKBP2-201ENST00000565969 475 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC006116.3-201ENST00000592968 361 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC069307.1-201ENST00000602820 447 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AL606834.2-201ENST00000602954 668 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC018695.5-201ENST00000605872 315 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MIR6798-201ENST00000612887 67 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC090517.2-201ENST00000614966 680 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC073534.2-201ENST00000620377 381 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MIR6863-201ENST00000636112 90 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 AC099654.13-201ENST00000639774 207 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.29□□□□□ -1.4
ERCC3P19447 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ERCC3P19447 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 ELF2P3-201ENST00000445099 1506 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 AC023421.1-201ENST00000590535 1785 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
ERCC3P19447 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC3P19447 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 OR4G2P-201ENST00000328113 903 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 Y_RNA.46-201ENST00000362695 102 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 RNA5SP326-201ENST00000363209 110 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 RNU6-97P-201ENST00000363387 104 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 RNU4-12P-201ENST00000365233 139 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
ERCC3P19447 Y_RNA.554-201ENST00000384672 102 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AL359704.1-201ENST00000411586 781 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AC096921.1-201ENST00000411661 375 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AC022028.1-201ENST00000412054 408 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC3P19447 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC3P19447 AC233728.2-201ENST00000425348 757 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 VN1R54P-201ENST00000435210 1049 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 UBE2V1P8-201ENST00000437166 265 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AL451074.3-201ENST00000437709 472 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 FABP3P2-201ENST00000453169 399 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AP001992.1-205ENST00000462248 379 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AC012170.1-201ENST00000495139 359 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.28□□□□□ -1.4
ERCC3P19447 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.28□□□□□ -1.4
ERCC3P19447 RNU2-46P-201ENST00000517038 113 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 AP003181.2-201ENST00000528941 181 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 CCNG2P1-201ENST00000549521 1000 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 RPL10P14-201ENST00000565265 298 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 UBE2FP2-201ENST00000566646 462 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 MIR4646-201ENST00000580775 63 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 RNU6-87P-201ENST00000607561 108 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 MIR6748-201ENST00000610433 71 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 CYP4F35P-202ENST00000636121 390 ntBASIC6.28□□□□□ -1.4
ERCC3P19447 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ERCC3P19447 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.28□□□□□ -1.4
ERCC3P19447 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
ERCC3P19447 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.4
ERCC3P19447 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC3P19447 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms