Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR5187-201ENST00000583479 76 ntBASIC3.88□□□□□ -1.79
TPM1P09493 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 AC005962.2-201ENST00000611427 652 ntBASIC3.88□□□□□ -1.79
TPM1P09493 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM1P09493 SRP72P2-201ENST00000344851 1979 ntBASIC3.88□□□□□ -1.79
TPM1P09493 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM1P09493 AC091152.2-201ENST00000591628 2569 ntBASIC3.88□□□□□ -1.79
TPM1P09493 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM1P09493 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TPM1P09493 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TPM1P09493 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 AC007496.3-201ENST00000624987 3443 ntBASIC3.87□□□□□ -1.79
TPM1P09493 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TPM1P09493 RNU4-31P-201ENST00000384211 141 ntBASIC3.87□□□□□ -1.79
TPM1P09493 RNU6-891P-201ENST00000384280 111 ntBASIC3.87□□□□□ -1.79
TPM1P09493 DNAJC19P6-201ENST00000401853 280 ntBASIC3.87□□□□□ -1.79
TPM1P09493 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TPM1P09493 AC126124.2-201ENST00000413542 321 ntBASIC3.87□□□□□ -1.79
TPM1P09493 AC241520.1-201ENST00000422654 1099 ntBASIC3.87□□□□□ -1.79
TPM1P09493 SDCBPP2-201ENST00000424643 885 ntBASIC3.87□□□□□ -1.79
TPM1P09493 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.87□□□□□ -1.79
TPM1P09493 FTH1P1-201ENST00000437933 532 ntBASIC3.87□□□□□ -1.79
TPM1P09493 RPL34P26-201ENST00000445636 354 ntBASIC3.87□□□□□ -1.79
TPM1P09493 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.87□□□□□ -1.79
TPM1P09493 OR7L1P-201ENST00000456181 380 ntBASIC3.87□□□□□ -1.79
TPM1P09493 HMGN1P18-201ENST00000457642 277 ntBASIC3.87□□□□□ -1.79
TPM1P09493 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
TPM1P09493 TPT1P3-201ENST00000492841 512 ntBASIC3.87□□□□□ -1.79
TPM1P09493 SETP14-201ENST00000497538 873 ntBASIC3.87□□□□□ -1.79
TPM1P09493 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TPM1P09493 AC005351.1-201ENST00000511152 786 ntBASIC3.87□□□□□ -1.79
TPM1P09493 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.87□□□□□ -1.79
TPM1P09493 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.87□□□□□ -1.79
TPM1P09493 RNU6-352P-201ENST00000516908 107 ntBASIC3.87□□□□□ -1.79
TPM1P09493 RAB9BP1-201ENST00000519581 626 ntBASIC3.87□□□□□ -1.79
TPM1P09493 IGHV3-76-201ENST00000522465 295 ntBASIC3.87□□□□□ -1.79
TPM1P09493 MED28P5-201ENST00000528254 438 ntBASIC3.87□□□□□ -1.79
TPM1P09493 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM1P09493 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.87□□□□□ -1.79
TPM1P09493 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.87□□□□□ -1.79
TPM1P09493 AGGF1P6-201ENST00000569213 976 ntBASIC3.87□□□□□ -1.79
TPM1P09493 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.87□□□□□ -1.79
TPM1P09493 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.87□□□□□ -1.79
TPM1P09493 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM1P09493 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 AC022031.1-201ENST00000585985 2593 ntBASIC3.86□□□□□ -1.79
TPM1P09493 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 HMGB1P13-201ENST00000406019 642 ntBASIC3.86□□□□□ -1.79
TPM1P09493 RNA5SP317-201ENST00000410176 116 ntBASIC3.86□□□□□ -1.79
TPM1P09493 RNA5SP311-201ENST00000411290 116 ntBASIC3.86□□□□□ -1.79
TPM1P09493 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
TPM1P09493 HMGB3P23-201ENST00000414981 585 ntBASIC3.86□□□□□ -1.79
TPM1P09493 AC245054.1-201ENST00000420944 258 ntBASIC3.86□□□□□ -1.79
TPM1P09493 RPL23AP33-201ENST00000442301 452 ntBASIC3.86□□□□□ -1.79
TPM1P09493 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.86□□□□□ -1.79
TPM1P09493 AL161747.1-201ENST00000480068 358 ntBASIC3.86□□□□□ -1.79
TPM1P09493 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.86□□□□□ -1.79
TPM1P09493 AC010460.1-201ENST00000507087 466 ntBASIC3.86□□□□□ -1.79
TPM1P09493 RNA5SP315-201ENST00000516340 116 ntBASIC3.86□□□□□ -1.79
TPM1P09493 RNA5SP312-201ENST00000517068 116 ntBASIC3.86□□□□□ -1.79
TPM1P09493 AL121594.4-201ENST00000556211 1196 ntBASIC3.86□□□□□ -1.79
TPM1P09493 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM1P09493 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM1P09493 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 AC069209.1-201ENST00000619282 651 ntBASIC3.86□□□□□ -1.79
TPM1P09493 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 MIR7641-1-201ENST00000627518 61 ntBASIC3.86□□□□□ -1.79
TPM1P09493 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM1P09493 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TPM1P09493 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TPM1P09493 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TPM1P09493 SPRR2C-201ENST00000290702 219 ntBASIC3.85□□□□□ -1.79
TPM1P09493 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
TPM1P09493 AL583834.1-201ENST00000406943 343 ntBASIC3.85□□□□□ -1.79
TPM1P09493 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TPM1P09493 MTND2P16-201ENST00000419987 799 ntBASIC3.85□□□□□ -1.79
TPM1P09493 RPL23AP82-202ENST00000427528 469 ntBASIC3.85□□□□□ -1.79
TPM1P09493 AP000907.1-201ENST00000428428 510 ntBASIC3.85□□□□□ -1.79
TPM1P09493 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
TPM1P09493 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM1P09493 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM1P09493 CENPBD1P1-201ENST00000464061 469 ntBASIC3.85□□□□□ -1.79
TPM1P09493 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms