Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPS24P8-201ENST00000431490 402 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 UBDP1-202ENST00000457888 382 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL1P09341 RPL37P6-202ENST00000464216 403 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.61□□□□□ -1.99
CXCL1P09341 PTGES3P3-201ENST00000511479 482 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 SCARNA14-201ENST00000516903 136 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.61□□□□□ -1.99
CXCL1P09341 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC078899.3-201ENST00000599065 212 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC012119.1-201ENST00000603184 222 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC069234.5-201ENST00000611056 416 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC121761.2-201ENST00000617300 689 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC069209.1-201ENST00000619282 651 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 MIR6733-201ENST00000635723 61 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL1P09341 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL1P09341 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL1P09341 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL1P09341 AC090337.1-201ENST00000579651 2074 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CXCL1P09341 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CXCL1P09341 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 AC093908.1-201ENST00000623125 8092 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 AP004289.2-201ENST00000444413 1457 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 MTND5P24-201ENST00000438892 1767 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 U8.9-201ENST00000365667 134 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 RPL5P18-201ENST00000406671 891 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 RPL18P10-201ENST00000425606 538 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL1P09341 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL1P09341 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC115115.1-201ENST00000449927 248 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC097262.1-201ENST00000452559 548 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL1P09341 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 RN7SL323P-201ENST00000494712 295 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.6□□□□□ -1.99
CXCL1P09341 ATG10-AS1-201ENST00000504846 648 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 FTH1P21-201ENST00000512179 511 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 RNA5SP76-201ENST00000516277 87 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 RNU4-18P-201ENST00000516751 149 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL1P09341 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.6□□□□□ -1.99
CXCL1P09341 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC010735.1-201ENST00000567305 1026 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 MIR7973-1-201ENST00000614683 76 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CXCL1P09341 AC007342.8-201ENST00000623278 678 ntBASIC2.6□□□□□ -1.99
CXCL1P09341 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CXCL1P09341 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL1P09341 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL1P09341 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.59□□□□□ -1.99
CXCL1P09341 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL1P09341 RNA5SP295-201ENST00000362655 121 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 ST13P16-201ENST00000401760 781 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 RN7SKP53-201ENST00000411337 315 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AC004987.3-201ENST00000413879 771 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL1P09341 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL1P09341 AC245054.1-201ENST00000420944 258 ntBASIC2.59□□□□□ -1.99
CXCL1P09341 AL139247.1-201ENST00000422768 325 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms