Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 OR5H2-201ENST00000355273 945 ntBASIC4.59□□□□□ -1.67
MMP3P08254 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MMP3P08254 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.59□□□□□ -1.67
MMP3P08254 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MMP3P08254 AL049545.1-201ENST00000401856 572 ntBASIC4.59□□□□□ -1.67
MMP3P08254 RNA5SP44-201ENST00000410446 133 ntBASIC4.59□□□□□ -1.67
MMP3P08254 MTND4P22-201ENST00000413116 1169 ntBASIC4.59□□□□□ -1.67
MMP3P08254 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 MTND2P18-201ENST00000419962 1030 ntBASIC4.59□□□□□ -1.67
MMP3P08254 PTP4A1P5-201ENST00000420305 455 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AC104454.1-201ENST00000421341 1401 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AL450326.2-201ENST00000421913 1962 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 SETP8-201ENST00000435341 628 ntBASIC4.59□□□□□ -1.67
MMP3P08254 CBX1P4-201ENST00000439415 457 ntBASIC4.59□□□□□ -1.67
MMP3P08254 Z83846.1-201ENST00000446798 265 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 AC006042.3-201ENST00000454684 1469 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AC005229.2-201ENST00000456995 399 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.59□□□□□ -1.67
MMP3P08254 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 DDX18P4-201ENST00000511690 1966 ntBASIC4.59□□□□□ -1.67
MMP3P08254 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.59□□□□□ -1.67
MMP3P08254 MTND2P26-201ENST00000528255 1029 ntBASIC4.59□□□□□ -1.67
MMP3P08254 PHBP17-201ENST00000528576 541 ntBASIC4.59□□□□□ -1.67
MMP3P08254 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.59□□□□□ -1.67
MMP3P08254 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 MIR5685-201ENST00000579080 79 ntBASIC4.59□□□□□ -1.67
MMP3P08254 MIR5684-201ENST00000585074 65 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 AC080013.3-201ENST00000606839 578 ntBASIC4.59□□□□□ -1.67
MMP3P08254 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AL138721.1-201ENST00000616756 179 ntBASIC4.59□□□□□ -1.67
MMP3P08254 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 MIR6075-201ENST00000620782 95 ntBASIC4.59□□□□□ -1.67
MMP3P08254 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 AC016588.2-201ENST00000632484 3021 ntBASIC4.59□□□□□ -1.67
MMP3P08254 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
MMP3P08254 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
MMP3P08254 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MMP3P08254 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MMP3P08254 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
MMP3P08254 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 FAM133CP-201ENST00000332869 704 ntBASIC4.58□□□□□ -1.68
MMP3P08254 Y_RNA.192-201ENST00000363977 102 ntBASIC4.58□□□□□ -1.68
MMP3P08254 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
MMP3P08254 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MMP3P08254 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 RNU6ATAC-201ENST00000408749 126 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 OR5BE1P-201ENST00000425977 939 ntBASIC4.58□□□□□ -1.68
MMP3P08254 MTCO1P3-201ENST00000429327 192 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AL008629.1-201ENST00000438615 184 ntBASIC4.58□□□□□ -1.68
MMP3P08254 MTND6P18-201ENST00000439477 513 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC007327.1-201ENST00000447461 264 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 AC104306.1-201ENST00000449702 371 ntBASIC4.58□□□□□ -1.68
MMP3P08254 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 AC079776.3-201ENST00000450665 370 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 ATG12P2-201ENST00000456830 416 ntBASIC4.58□□□□□ -1.68
MMP3P08254 RPL23AP12-201ENST00000467573 473 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC011979.1-201ENST00000472300 483 ntBASIC4.58□□□□□ -1.68
MMP3P08254 MTND2P14-201ENST00000482139 351 ntBASIC4.58□□□□□ -1.68
MMP3P08254 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 RPS3AP22-201ENST00000488297 769 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC118282.2-201ENST00000508739 374 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC117522.2-201ENST00000510049 657 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 RNU5A-4P-201ENST00000516588 111 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 AC010306.1-201ENST00000523223 1117 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MMP3P08254 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.58□□□□□ -1.68
MMP3P08254 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.58□□□□□ -1.68
MMP3P08254 AC090751.1-201ENST00000566966 267 ntBASIC4.58□□□□□ -1.68
MMP3P08254 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.58□□□□□ -1.68
MMP3P08254 AC024220.1-201ENST00000603675 484 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms