Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPS4XP13-201ENST00000483219 789 ntBASIC3.72□□□□□ -1.81
COL4A1P02462 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
COL4A1P02462 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A1P02462 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A1P02462 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.72□□□□□ -1.81
COL4A1P02462 AC007998.5-201ENST00000622938 237 ntBASIC3.72□□□□□ -1.81
COL4A1P02462 AC091903.1-201ENST00000624322 454 ntBASIC3.72□□□□□ -1.81
COL4A1P02462 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A1P02462 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A1P02462 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A1P02462 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
COL4A1P02462 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.72□□□□□ -1.81
COL4A1P02462 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COL4A1P02462 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
COL4A1P02462 NUP35P1-201ENST00000422734 947 ntBASIC3.71□□□□□ -1.81
COL4A1P02462 AC009263.1-201ENST00000441193 1239 ntBASIC3.71□□□□□ -1.81
COL4A1P02462 HMGB1P3-201ENST00000502802 616 ntBASIC3.71□□□□□ -1.81
COL4A1P02462 AC087276.1-201ENST00000529659 480 ntBASIC3.71□□□□□ -1.81
COL4A1P02462 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.71□□□□□ -1.81
COL4A1P02462 HMGB1P6-201ENST00000569046 646 ntBASIC3.71□□□□□ -1.81
COL4A1P02462 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.71□□□□□ -1.81
COL4A1P02462 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.71□□□□□ -1.81
COL4A1P02462 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
COL4A1P02462 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
COL4A1P02462 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A1P02462 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A1P02462 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.71□□□□□ -1.82
COL4A1P02462 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL4A1P02462 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A1P02462 MIR449A-201ENST00000362113 91 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 RNU6-7-201ENST00000364784 107 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 RNU6-8-201ENST00000365467 107 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 ISCA1P2-201ENST00000438679 421 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A1P02462 AP002404.1-201ENST00000532005 451 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A1P02462 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A1P02462 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A1P02462 AC007318.2-201ENST00000620999 243 ntBASIC3.71□□□□□ -1.82
COL4A1P02462 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.71□□□□□ -1.82
COL4A1P02462 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COL4A1P02462 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A1P02462 ZNF90P1-201ENST00000480493 1951 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
COL4A1P02462 U3.12-201ENST00000364498 214 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RN7SKP56-201ENST00000410513 331 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 SETP15-201ENST00000412724 337 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.7□□□□□ -1.82
COL4A1P02462 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.7□□□□□ -1.82
COL4A1P02462 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 AC010401.1-201ENST00000463867 348 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RN7SL429P-201ENST00000479090 223 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RN7SL489P-201ENST00000486185 223 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RN7SL327P-201ENST00000488659 223 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 AC108078.3-201ENST00000502633 489 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.7□□□□□ -1.82
COL4A1P02462 AC010306.1-201ENST00000523223 1117 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.7□□□□□ -1.82
COL4A1P02462 DPRXP4-201ENST00000578053 568 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RN7SL853P-201ENST00000617250 223 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
COL4A1P02462 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A1P02462 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
COL4A1P02462 AC018529.3-201ENST00000624212 2254 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A1P02462 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A1P02462 OR1S2-201ENST00000302592 978 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AL031679.1-201ENST00000400616 525 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AL109933.2-201ENST00000452651 260 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AC004924.1-201ENST00000480160 781 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.69□□□□□ -1.82
COL4A1P02462 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A1P02462 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AC007566.2-201ENST00000603642 413 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A1P02462 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A1P02462 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A1P02462 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A1P02462 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL4A1P02462 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL4A1P02462 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.69□□□□□ -1.82
COL4A1P02462 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A1P02462 AC093849.1-201ENST00000563631 2209 ntBASIC3.69□□□□□ -1.82
COL4A1P02462 AC019072.1-201ENST00000604535 1551 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
COL4A1P02462 NACA3P-201ENST00000359690 648 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A1P02462 METTL15P1-201ENST00000481421 1045 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.68□□□□□ -1.82
COL4A1P02462 HIGD1AP3-201ENST00000515857 278 ntBASIC3.68□□□□□ -1.82
COL4A1P02462 OR5G4P-201ENST00000525251 760 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms