Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 PNPT1P2-201ENST00000456768 2050 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC28A1O00337 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC005261.4-201ENST00000600047 1385 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC28A1O00337 RN7SKP44-201ENST00000363602 316 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 RNU11-4P-201ENST00000391149 133 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 MCTS2P-201ENST00000394552 546 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 RNA5SP239-201ENST00000410218 129 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 SFR1P2-201ENST00000421841 730 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AL592293.2-201ENST00000422292 996 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC28A1O00337 FTH1P6-201ENST00000430768 320 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC083863.1-201ENST00000438811 231 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC28A1O00337 TPT1P13-201ENST00000449760 499 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 RPS29P33-201ENST00000456717 146 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 NF1P3-201ENST00000457709 450 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 RN7SL738P-201ENST00000470264 297 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC105137.1-201ENST00000484355 562 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC005726.1-201ENST00000494679 427 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 CDH12P4-201ENST00000517835 295 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 CDH12P3-201ENST00000517935 295 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 CDH12P1-201ENST00000518435 295 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AC007448.1-201ENST00000582714 234 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 HSPE1P14-201ENST00000605812 302 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AP002802.2-201ENST00000605877 235 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC121761.2-201ENST00000617300 689 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 AL138960.2-201ENST00000625145 535 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 AC126544.2-201ENST00000625174 749 ntBASIC3.82□□□□□ -1.8
SLC28A1O00337 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC28A1O00337 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC28A1O00337 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 MTCO1P14-201ENST00000441695 1559 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 MTCO1P24-201ENST00000515438 1558 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
SLC28A1O00337 MTND5P31-201ENST00000419366 1374 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 SSXP10-201ENST00000402595 565 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 MTCO3P31-201ENST00000405526 789 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 TPT1P2-201ENST00000413105 503 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC092832.1-201ENST00000422934 400 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 PTP4A1P7-201ENST00000423476 514 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AL590399.6-201ENST00000446396 307 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 DNAJC19P1-201ENST00000455312 319 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 HMGB1P38-201ENST00000490557 577 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC106872.2-201ENST00000494303 480 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 RNF138P1-201ENST00000502765 546 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC011352.3-201ENST00000505162 593 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 TMEM248P1-201ENST00000510579 951 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AC005798.1-201ENST00000513715 387 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 RNU4-60P-201ENST00000517239 135 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC28A1O00337 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC28A1O00337 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC28A1O00337 CYCSP29-201ENST00000533731 318 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC28A1O00337 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AC135001.1-201ENST00000544546 283 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 CR383656.6-201ENST00000550518 394 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC28A1O00337 ZNF971P-201ENST00000562068 1249 ntBASIC3.81□□□□□ -1.8
SLC28A1O00337 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms