Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 ANAPC10P1-201ENST00000395991 556 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 EIF5P1-201ENST00000400019 1231 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 OR7E156P-201ENST00000400303 464 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP129-201ENST00000410276 118 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL691449.1-201ENST00000426570 421 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC023347.2-201ENST00000433994 462 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL36AP6-201ENST00000435770 321 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 CEACAMP7-201ENST00000444105 496 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC115115.1-201ENST00000449927 248 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RPS11P1-201ENST00000451072 473 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AP000705.1-201ENST00000454567 350 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC084754.1-201ENST00000463466 464 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RPS20P21-201ENST00000466859 343 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL601P-201ENST00000471221 293 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC084357.1-201ENST00000473404 255 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 ST13P14-201ENST00000474095 734 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL7P16-201ENST00000479738 738 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL170P-201ENST00000487098 295 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MGST2-204ENST00000506797 634 ntTSL 2 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP362-201ENST00000516048 118 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU6-579P-201ENST00000516879 102 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 OR8G5-201ENST00000524943 1041 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 OR7E13P-201ENST00000526052 910 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC026333.2-201ENST00000542164 106 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 DNAJC8P1-201ENST00000554535 372 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR3670-2-201ENST00000582974 65 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR3670-1-201ENST00000584160 65 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR3670-3-201ENST00000584855 65 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR6768-201ENST00000610734 72 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR3670-4-201ENST00000612260 65 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AF001550.2-201ENST00000636643 217 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC138915.1-201ENST00000565427 1685 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 FAM35BP-202ENST00000497389 3337 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP305-201ENST00000362665 119 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU11-4P-201ENST00000391149 133 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL355379.1-201ENST00000405542 640 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL390879.2-203ENST00000426943 1121 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 MTATP6P4-201ENST00000427725 675 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL21P110-201ENST00000433345 446 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 VN1R54P-201ENST00000435210 1049 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RPS3AP54-201ENST00000435535 734 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 HMGB3P6-201ENST00000444896 598 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC027673.1-201ENST00000456245 405 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 MTND2P28-201ENST00000457540 1044 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL21P10-201ENST00000463521 490 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC087879.1-201ENST00000474343 374 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AP004217.1-201ENST00000480579 346 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC026979.1-201ENST00000492525 396 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AP002812.1-201ENST00000495378 474 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 AK6-204ENST00000512561 587 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU1-143P-201ENST00000516296 146 ntBASIC1.8□□□□□ -2.12
CHKB-CPT1BH3BT56 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms