Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC006960.3-201ENST00000561845 705 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC090312.2-201ENST00000582687 378 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 IPO5P1-202ENST00000600039 287 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AL163642.2-201ENST00000604722 1019 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC239803.2-201ENST00000610161 430 ntBASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.93□□□□□ -1.94
RBFOX3A6NFN3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RNA5SP42-201ENST00000364278 115 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 OR52E6-202ENST00000379946 954 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 EIF5P1-201ENST00000400019 1231 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 TAF9BP2-201ENST00000400856 499 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RNU4-25P-201ENST00000410569 230 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC093578.1-201ENST00000415219 368 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 HMGB3P20-201ENST00000417997 600 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC245291.1-201ENST00000419501 328 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC023128.2-201ENST00000420880 1223 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RPS27AP7-201ENST00000422792 455 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 GTF2IP23-201ENST00000423746 351 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 COX6B1P7-201ENST00000430845 235 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MRPL50P1-201ENST00000431951 384 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MRPS18BP2-201ENST00000434310 759 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RPS3AP54-201ENST00000435535 734 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC006994.1-201ENST00000438212 839 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL513343.1-201ENST00000451818 792 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RN7SL604P-201ENST00000492589 296 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC114967.1-201ENST00000504890 259 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RAC1P2-201ENST00000511164 579 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL121766.1-201ENST00000547436 487 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL161729.3-201ENST00000603533 673 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC009948.4-201ENST00000604692 675 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MIR6868-201ENST00000611215 58 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MIR378J-201ENST00000611988 109 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MIR6798-201ENST00000612887 67 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AL139254.3-201ENST00000641097 674 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 MTND5P27-201ENST00000428871 1720 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 PABPC1P7-201ENST00000413177 1513 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 AC091152.2-201ENST00000591628 2569 ntBASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
RBFOX3A6NFN3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 AC009501.3-201ENST00000605001 1352 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 U3.22-201ENST00000391120 215 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 RAB28P1-201ENST00000411517 641 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 RPL31P2-201ENST00000413849 377 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 UBE2V1P1-201ENST00000430836 445 ntBASIC2.91□□□□□ -1.94
RBFOX3A6NFN3 ZNF965P-201ENST00000432501 817 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms