Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RNU6-1226P-201ENST00000384317 107 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MIR558-201ENST00000384920 94 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL359634.1-202ENST00000404721 284 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RPL5P18-201ENST00000406671 891 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL161631.1-201ENST00000417933 486 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ARL5AP1-201ENST00000418991 388 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MED13P1-201ENST00000428342 171 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 GPM6BP2-201ENST00000432046 144 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RPEP4-201ENST00000437636 602 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC096775.1-201ENST00000437724 448 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 FHP1-201ENST00000442741 703 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 GPM6BP1-201ENST00000446387 144 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MEMO1P4-201ENST00000453590 386 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC108059.3-201ENST00000456388 214 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL590639.1-201ENST00000456484 337 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 PLGLA-201ENST00000465668 449 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL049714.1-201ENST00000466686 347 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC090602.1-201ENST00000469695 252 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RPL21P99-201ENST00000480369 423 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RN7SL413P-201ENST00000482700 297 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RN7SL655P-201ENST00000486087 298 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RNU6-559P-201ENST00000516151 98 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MIR2117-201ENST00000516780 80 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RN7SKP219-201ENST00000516825 296 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.711-201ENST00000516993 102 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SUMO2P20-201ENST00000520803 283 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 FRG2DP-202ENST00000566967 323 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC026898.1-201ENST00000586404 571 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AP001029.3-201ENST00000588063 596 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC006116.10-201ENST00000591836 581 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 DPPA3P3-201ENST00000603842 430 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC040168.1-201ENST00000623594 991 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC138305.3-201ENST00000624988 240 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 AC011493.1-201ENST00000596753 1632 ntBASIC5.15□□□□□ -1.58
SHISA3A0PJX4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 AC104964.3-201ENST00000606115 2860 ntBASIC5.15□□□□□ -1.58
SHISA3A0PJX4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 AC027088.4-201ENST00000611559 1947 ntBASIC5.15□□□□□ -1.58
SHISA3A0PJX4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 AP004289.2-201ENST00000444413 1457 ntBASIC5.15□□□□□ -1.58
SHISA3A0PJX4 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.15□□□□□ -1.58
SHISA3A0PJX4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHISA3A0PJX4 AL139276.1-201ENST00000311910 1001 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 AC067945.1-201ENST00000342609 618 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.22-201ENST00000362492 102 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 RNU5E-8P-201ENST00000363502 116 ntBASIC5.15□□□□□ -1.59
SHISA3A0PJX4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms