Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 ZNF652P1-201ENST00000442420 1309 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AL136964.1-201ENST00000622038 2990 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AL031679.1-201ENST00000400616 525 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 TPMTP2-201ENST00000414372 726 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 RPL7P30-201ENST00000420888 709 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 GLRXP1-201ENST00000423261 334 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 USP9YP9-201ENST00000429406 715 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 HSPE1P28-201ENST00000443139 211 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 SUMO2P2-201ENST00000456482 255 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010468.1-201ENST00000461022 817 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC069304.1-201ENST00000491593 704 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 MTCO3P44-201ENST00000510977 541 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010625.1-201ENST00000511296 403 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 OR7H2P-201ENST00000513483 306 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 IGKV2D-36-201ENST00000518643 226 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 OR6C73P-201ENST00000546432 358 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091515.1-201ENST00000548110 679 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC053481.3-201ENST00000577881 843 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010680.3-201ENST00000604215 520 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC112230.1-201ENST00000604342 547 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 FP325313.1-201ENST00000638228 703 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 SAMMSON-226ENST00000642089 1582 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AC097714.1-201ENST00000511272 1647 ntBASIC5.45□□□□□ -1.54
COL4A3BPQ9Y5P4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 RNU6-500P-201ENST00000362349 107 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 RNU6-723P-201ENST00000383973 107 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR124-3-201ENST00000384866 87 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 DHFRP6-201ENST00000401776 268 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MTATP6P27-201ENST00000416987 621 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MTCO2P5-201ENST00000422621 426 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MTND1P20-201ENST00000430341 950 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 ELOCP18-201ENST00000434209 337 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 H2AFZP5-201ENST00000446960 382 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 PAXBP1P1-201ENST00000449315 447 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 SLC25A18P1-201ENST00000449385 454 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 RPS20P24-201ENST00000457473 361 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 RPL23AP56-201ENST00000460778 453 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 HMGB3P16-201ENST00000508037 287 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 LTV1P1-201ENST00000510683 1237 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 BNIP3P1-201ENST00000547295 580 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC136618.2-201ENST00000575091 400 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR3667-201ENST00000581025 74 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AL357080.1-201ENST00000617394 239 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC008443.7-201ENST00000622195 246 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091931.1-201ENST00000623488 728 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC091046.3-201ENST00000631455 1574 ntBASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.44□□□□□ -1.54
COL4A3BPQ9Y5P4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms