Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 RPL23AP46-201ENST00000438548 490 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 MTND1P33-201ENST00000446251 917 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 RN7SL93P-201ENST00000463035 293 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC022034.3-201ENST00000471393 478 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC126121.1-201ENST00000482313 553 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF6Q9Y252 FTH1P21-201ENST00000512179 511 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 OR4R2P-201ENST00000530815 597 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC135001.1-201ENST00000544546 283 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC023824.3-201ENST00000569003 562 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 RPL23AP87-202ENST00000573039 466 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 RN7SL703P-201ENST00000578485 302 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 RN7SL622P-201ENST00000585292 275 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC115621.1-201ENST00000604653 858 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 BNIP3P4-201ENST00000604946 565 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC084824.5-201ENST00000612009 413 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AL359535.1-201ENST00000612100 1087 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC090246.1-201ENST00000616499 426 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 AC106730.3-201ENST00000624568 641 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 AL109659.3-201ENST00000624985 950 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
RNF6Q9Y252 IPO8P1-201ENST00000455509 3109 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 MTND4P10-201ENST00000446199 1363 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 PNPT1P2-201ENST00000456768 2050 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF6Q9Y252 ERCC6-202ENST00000374127 1782 ntBASIC3.74□□□□□ -1.81
RNF6Q9Y252 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC00561-201ENST00000565815 2738 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF6Q9Y252 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 MTCO1P4-201ENST00000520516 1409 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 YWHAZP8-201ENST00000436935 731 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 FABP5P3-201ENST00000437960 408 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC006994.1-201ENST00000438212 839 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 GXYLT1P1-201ENST00000446657 490 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 RPL36AP13-201ENST00000457490 317 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 S100A11P1-201ENST00000477525 312 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 RPS4XP6-201ENST00000477670 797 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC015724.1-201ENST00000478577 156 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AF213884.1-201ENST00000488102 463 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF6Q9Y252 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC008885.2-201ENST00000509506 930 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 RNU7-143P-201ENST00000516781 65 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 MTND1P6-201ENST00000523621 946 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 AC020978.9-201ENST00000624380 1141 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 AL133412.1-201ENST00000380194 2992 ntBASIC3.73□□□□□ -1.81
RNF6Q9Y252 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF6Q9Y252 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF6Q9Y252 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF6Q9Y252 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF6Q9Y252 NSRP1P1-201ENST00000444067 1693 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF6Q9Y252 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF6Q9Y252 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 PTMAP2-201ENST00000397627 327 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 AC093698.1-201ENST00000423843 571 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 DEFB130D-201ENST00000426866 237 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 FTH1P6-201ENST00000430768 320 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 RPL21P110-201ENST00000433345 446 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF6Q9Y252 RRM2P4-201ENST00000441721 562 ntBASIC3.72□□□□□ -1.81
RNF6Q9Y252 HSFY3P-201ENST00000444242 1191 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms