Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RN7SKP237-201ENST00000364663 301 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 U8.8-201ENST00000365399 135 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RNU6-326P-201ENST00000365480 107 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RNA5SP53-201ENST00000391299 120 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RPS29P14-201ENST00000431518 171 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC009518.3-201ENST00000438972 253 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AL353691.1-201ENST00000451332 387 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC104073.1-201ENST00000451988 151 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC117395.2-201ENST00000463122 1128 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AL136126.1-201ENST00000473603 402 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RN7SL654P-201ENST00000479178 292 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 FTH1P23-201ENST00000492727 550 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC135721.1-201ENST00000497954 479 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC113155.1-201ENST00000511141 769 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RNA5SP518-201ENST00000515957 119 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC087369.1-201ENST00000520775 996 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MIR4428-201ENST00000584884 73 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC006254.2-201ENST00000603259 279 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC007566.2-201ENST00000603642 413 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 AC098826.3-201ENST00000603823 466 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 MFSD8-218ENST00000641186 4448 ntBASIC6.87□□□□□ -1.31
LHX6Q9UPM6 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LHX6Q9UPM6 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC068870.1-201ENST00000563737 2455 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RNY3P4-201ENST00000384428 101 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 SNORA7A-201ENST00000384765 139 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL079342.1-201ENST00000401460 267 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RPL12P23-201ENST00000405880 490 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL513475.1-201ENST00000406602 315 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RN7SKP206-201ENST00000410823 293 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RN7SKP261-201ENST00000410948 278 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RNU6-516P-201ENST00000411381 104 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 MTCO1P39-201ENST00000426148 480 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC239367.3-201ENST00000428996 814 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RPS17P13-201ENST00000448974 407 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC022034.3-201ENST00000471393 478 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC010409.1-201ENST00000487382 476 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC093840.1-201ENST00000511599 336 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 OR7H2P-201ENST00000513483 306 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RNU6-1333P-201ENST00000516162 93 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RNU6-426P-201ENST00000516464 97 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AC084121.1-201ENST00000533882 835 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.86□□□□□ -1.31
LHX6Q9UPM6 MIR5696-201ENST00000578474 85 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 MIR6886-201ENST00000619864 61 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 RN7SL680P-201ENST00000620379 299 ntBASIC6.86□□□□□ -1.31
LHX6Q9UPM6 AL161637.1-201ENST00000622380 412 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms