Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC083843.3-201ENST00000623679 2186 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AL035423.1-201ENST00000420331 213 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 RPS17P13-201ENST00000448974 407 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 GTF2IP12-201ENST00000456547 356 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 SNORD105B-201ENST00000458770 79 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC008562.1-201ENST00000521763 330 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC010306.1-201ENST00000523223 1117 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 MIR4512-201ENST00000583257 77 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC104662.1-201ENST00000604448 511 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC046144.1-201ENST00000478559 1853 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC139713.2-215ENST00000641428 5037 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 BDP1P-201ENST00000582658 1990 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC013262.1-201ENST00000426710 252 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 MTND2P39-201ENST00000457230 764 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AL136126.1-201ENST00000473603 402 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC010683.1-201ENST00000473673 378 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 RFPL4AP5-201ENST00000514977 504 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC068339.2-201ENST00000534395 618 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC087894.1-201ENST00000538359 518 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AL136370.1-201ENST00000608166 691 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC103798.2-201ENST00000624292 632 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AL392088.2-201ENST00000637607 285 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 AC017104.5-201ENST00000637647 639 ntBASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM4Q9ULL8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC011155.1-201ENST00000316512 456 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 MIR490-201ENST00000384865 128 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 DNAJC19P6-201ENST00000401853 280 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 MTATP6P31-201ENST00000406985 692 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 RPL7P24-201ENST00000493052 752 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 NAMPTP2-201ENST00000505629 1115 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 RNA5SP208-201ENST00000516156 78 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 MIR4325-201ENST00000583049 90 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 NF1P5-201ENST00000588287 448 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC068620.3-201ENST00000602749 560 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AL133445.2-201ENST00000611191 527 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC005156.1-201ENST00000613371 573 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AP003476.1-201ENST00000623984 516 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC244258.1-201ENST00000637553 1071 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC119674.1-207ENST00000641355 633 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 AC008079.2-201ENST00000623543 20396 ntBASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM4Q9ULL8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 VN1R51P-201ENST00000411675 945 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 MTND6P18-201ENST00000439477 513 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 UBE2V1P5-201ENST00000440070 405 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AC002542.1-201ENST00000440683 193 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AC092809.1-201ENST00000441469 474 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 UBDP1-202ENST00000457888 382 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AC026784.1-201ENST00000507986 352 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 RN7SKP283-201ENST00000517197 270 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 MIR4716-201ENST00000579628 84 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 NTAN1P1-201ENST00000603150 646 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 BNIP3P31-201ENST00000604515 566 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 MIR7154-201ENST00000620673 73 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 AL138955.1-201ENST00000622881 1040 ntBASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SHROOM4Q9ULL8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SHROOM4Q9ULL8 AL049737.1-201ENST00000413920 1403 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms