Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 RNU1-108P-201ENST00000362556 161 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 RNA5SP283-201ENST00000365604 119 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 RNU6-83P-201ENST00000384568 112 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL590084.1-201ENST00000407885 387 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 MIR1303-201ENST00000408625 86 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC099336.2-201ENST00000422457 254 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL158073.1-201ENST00000426848 1104 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL117339.2-201ENST00000430475 180 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL357520.1-201ENST00000441557 453 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 FGF7P5-201ENST00000441829 291 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC099560.2-201ENST00000457554 255 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 RN7SL585P-201ENST00000470538 280 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC022795.1-201ENST00000473808 480 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL132838.2-201ENST00000492041 314 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 SNORA3.4-201ENST00000515969 96 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC090695.1-201ENST00000561269 1222 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 MIR5708-201ENST00000579723 85 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC012417.1-201ENST00000582307 1039 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC110743.1-201ENST00000584870 478 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AP001542.2-201ENST00000593141 364 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC092653.1-201ENST00000608509 531 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AP000238.1-201ENST00000608759 426 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 MIR6868-201ENST00000611215 58 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC109454.4-201ENST00000623411 649 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC000367.1-201ENST00000452711 1766 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 OR5H2-201ENST00000355273 945 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 Y_RNA.169-201ENST00000363745 96 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 SFR1P1-201ENST00000403720 688 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 RPF2P1-201ENST00000424137 906 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 RPS26P47-201ENST00000427219 348 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC009263.1-201ENST00000441193 1239 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 Z99714.1-201ENST00000450463 807 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 RPS11P1-201ENST00000451072 473 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AL354710.1-201ENST00000453641 246 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 APOOP2-201ENST00000461561 539 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 MTND2P14-201ENST00000482139 351 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 RPL29P14-201ENST00000495837 428 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC084024.2-201ENST00000503480 791 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC025554.1-201ENST00000505641 188 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC105313.1-201ENST00000509121 353 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC117522.2-201ENST00000510049 657 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC006499.6-201ENST00000511169 607 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 FTH1P21-201ENST00000512179 511 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC108471.1-201ENST00000513977 287 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 IFITM8P-201ENST00000522529 394 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 NIFKP8-201ENST00000560500 874 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AGGF1P6-201ENST00000569213 976 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC025627.2-201ENST00000576220 160 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms