Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 MTND4LP24-201ENST00000572277 291 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC099489.2-201ENST00000574976 260 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 BNIP3P11-201ENST00000603878 563 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AL159169.3-201ENST00000608871 561 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC105429.2-201ENST00000610567 517 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC096577.2-201ENST00000611455 153 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC008121.2-201ENST00000614647 523 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AP000553.6-201ENST00000641242 118 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC009093.8-201ENST00000641769 292 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 CR381670.1-201ENST00000624291 1693 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 AC073346.2-201ENST00000624724 2058 ntBASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA3Q9UI47 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 EXOC5P1-201ENST00000510543 1969 ntBASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CTNNA3Q9UI47 RNA5SP72-201ENST00000364442 117 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 HMGB3P20-201ENST00000417997 600 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 NIPA2P2-201ENST00000496376 1083 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC068305.1-201ENST00000497406 726 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 CAB39P1-201ENST00000502277 460 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC110792.2-201ENST00000510278 224 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC016550.3-201ENST00000515706 767 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 SNORA74D-201ENST00000516404 141 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 PRO1804-201ENST00000623780 2050 ntBASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.4□□□□□ -1.71
CTNNA3Q9UI47 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 RNU6-452P-201ENST00000384406 107 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 U8.11-201ENST00000384699 133 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 U8.12-201ENST00000384701 133 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC010655.1-201ENST00000449336 292 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 TVP23BP2-201ENST00000455082 615 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 U8.18-201ENST00000459285 133 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 RPL9P32-201ENST00000464118 620 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 UBE2CP3-201ENST00000502715 450 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 HMGB1P47-201ENST00000511281 589 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 RN7SKP83-201ENST00000516512 178 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC005972.3-201ENST00000606304 481 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AL391497.1-201ENST00000608671 547 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AL034408.1-202ENST00000636088 415 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 AC138649.5-201ENST00000637456 137 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
CTNNA3Q9UI47 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 MIR421-201ENST00000365696 85 ntBASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 RNU4-31P-201ENST00000384211 141 ntBASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 MTHFD2P2-201ENST00000407725 247 ntBASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 AL355994.1-201ENST00000424379 260 ntBASIC4.38□□□□□ -1.71
CTNNA3Q9UI47 AC002075.2-201ENST00000425207 252 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms