Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL133445.2-201ENST00000611191 527 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AL354696.1-201ENST00000614652 497 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 MIR6075-201ENST00000620782 95 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 ATE1-AS1-202ENST00000636460 506 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 GTF2H2B-203ENST00000508065 1432 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 TAF9BP2-201ENST00000400856 499 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC091286.1-201ENST00000431233 461 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 USP9YP7-201ENST00000436723 430 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC007000.2-201ENST00000442564 487 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 USP9YP32-201ENST00000452432 430 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 RNA5SP208-201ENST00000516156 78 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AP002812.4-201ENST00000532139 286 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC090877.1-201ENST00000561418 344 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC135178.6-201ENST00000605314 398 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 BRDTP1-201ENST00000605735 677 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 AC090617.9-201ENST00000623751 147 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 CR392039.4-201ENST00000624968 501 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 CR381670.1-201ENST00000624291 1693 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CLIP2Q9UDT6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLIP2Q9UDT6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLIP2Q9UDT6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLIP2Q9UDT6 AL161912.2-201ENST00000565707 3007 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 MIR449B-201ENST00000384995 97 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC092832.1-201ENST00000422934 400 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 FAR1P1-201ENST00000427163 934 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AL035458.1-201ENST00000433096 585 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC009263.1-201ENST00000441193 1239 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 SETD6P1-201ENST00000444575 317 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 MTCO3P16-201ENST00000454456 754 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 MTCO3P20-201ENST00000454926 688 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC084198.1-201ENST00000477747 402 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC012170.1-201ENST00000495139 359 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC103833.1-201ENST00000517442 172 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC026403.1-201ENST00000518938 295 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC004923.2-201ENST00000529649 369 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 ZNF92P3-201ENST00000596594 954 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 MFSD8-236ENST00000641509 4050 ntBASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP2Q9UDT6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP2Q9UDT6 AC138393.1-206ENST00000540997 1886 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms