Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 FTH1P6-201ENST00000430768 320 ntBASIC3.2□□□□□ -1.9
CHD7Q9P2D1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 AC008549.1-201ENST00000512900 643 ntBASIC3.2□□□□□ -1.9
CHD7Q9P2D1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 AL049874.4-201ENST00000557593 255 ntBASIC3.2□□□□□ -1.9
CHD7Q9P2D1 AC096947.1-201ENST00000603233 470 ntBASIC3.2□□□□□ -1.9
CHD7Q9P2D1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHD7Q9P2D1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AL445528.1-201ENST00000426330 420 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 HSPE1P6-201ENST00000479457 291 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 ARL4AP1-201ENST00000503220 705 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AP002512.4-202ENST00000641599 4530 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 BX276092.3-201ENST00000424182 230 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 MRPS33P4-201ENST00000434892 317 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 RPS26P15-201ENST00000488067 348 ntBASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CHD7Q9P2D1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 MIR34A-201ENST00000385130 110 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 MIR7111-201ENST00000619751 72 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 CR381670.1-201ENST00000624291 1693 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC015813.6-201ENST00000624409 5808 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 Y_RNA.238-201ENST00000364441 102 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 HMGN2P8-201ENST00000391458 268 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AL645937.1-202ENST00000421799 937 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC027290.2-201ENST00000623210 18662 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC099063.2-201ENST00000446360 662 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC114781.4-201ENST00000513707 639 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 Y_RNA.676-201ENST00000516393 96 ntBASIC3.18□□□□□ -1.9
CHD7Q9P2D1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHD7Q9P2D1 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AP000936.2-201ENST00000447151 681 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC005229.2-201ENST00000456995 399 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 RFPL4AP3-201ENST00000515267 345 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC079600.2-201ENST00000550076 130 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 MIR486-1-201ENST00000612171 68 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC099506.2-201ENST00000623074 221 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AL035425.3-201ENST00000564206 4996 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 MIR93-201ENST00000385024 80 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 TOMM20P4-201ENST00000427861 435 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
CHD7Q9P2D1 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHD7Q9P2D1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHD7Q9P2D1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD7Q9P2D1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD7Q9P2D1 SNORD74.4-201ENST00000364129 80 ntBASIC3.16□□□□□ -1.9
CHD7Q9P2D1 RNU1-112P-201ENST00000364401 164 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms