Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 MIR937-201ENST00000401271 86 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AL590704.1-201ENST00000402856 794 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC007967.1-201ENST00000455422 1159 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AP000563.1-201ENST00000490865 758 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 SETP14-201ENST00000497538 873 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC010460.1-201ENST00000507087 466 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC093853.1-201ENST00000515689 483 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 RNU2-58P-201ENST00000516403 183 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC007991.1-201ENST00000522680 631 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 MIR8058-201ENST00000615737 89 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 LINC00216-201ENST00000623548 1126 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AC138915.3-201ENST00000562908 1389 ntBASIC3.36□□□□□ -1.87
VAPAQ9P0L0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAPAQ9P0L0 AL353746.1-201ENST00000566293 6881 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 SNORA56-201ENST00000383966 129 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RNU6-356P-201ENST00000384140 107 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RPL17P36-201ENST00000420302 549 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RPS7P5-201ENST00000441482 581 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 HSFY6P-201ENST00000445573 403 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RPS20P21-201ENST00000466859 343 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RPL5P23-201ENST00000496040 868 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AL139099.1-201ENST00000497398 403 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 MTCO1P30-201ENST00000515244 580 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AP001636.2-201ENST00000525517 696 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 MTCO3P22-201ENST00000603219 784 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 RNA5SP108-201ENST00000605921 117 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAPAQ9P0L0 AL049737.1-201ENST00000413920 1403 ntBASIC3.35□□□□□ -1.87
VAPAQ9P0L0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AC119744.1-201ENST00000454746 1715 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 HMGB1P10-201ENST00000395823 563 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 MTATP6P31-201ENST00000406985 692 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 RNU2-37P-201ENST00000410695 177 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 RN7SKP53-201ENST00000411337 315 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AC017079.2-201ENST00000416102 485 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 RPL12P26-201ENST00000452430 487 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.34□□□□□ -1.87
VAPAQ9P0L0 CYCSP20-201ENST00000473154 315 ntBASIC3.34□□□□□ -1.87
VAPAQ9P0L0 MTND3P6-201ENST00000485242 339 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms