Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 MTCYBP21-201ENST00000443300 1113 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC068587.1-201ENST00000483613 781 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 MTND5P21-201ENST00000531961 522 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 ZNF192P1-203ENST00000565888 810 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC084036.1-201ENST00000609190 508 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC011472.4-201ENST00000615848 491 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL391261.4-201ENST00000616012 481 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
TREX1Q9NSU2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TREX1Q9NSU2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
TREX1Q9NSU2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TREX1Q9NSU2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 RPL21P17-201ENST00000397467 475 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 HMGB3P18-201ENST00000406327 590 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 CYCSP4-201ENST00000429682 331 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AL445584.1-201ENST00000431451 330 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ELOCP11-201ENST00000436690 332 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 RRM2P4-201ENST00000441721 562 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC245517.2-201ENST00000442890 346 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ELOCP16-201ENST00000444494 332 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AL357552.1-201ENST00000445254 415 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 MRPS31P2-201ENST00000451581 518 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 RPL7L1P8-201ENST00000469911 741 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC005921.1-201ENST00000510589 286 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC108120.2-201ENST00000512973 294 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 GTF2IP22-201ENST00000554443 182 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 MIR4425-201ENST00000580572 84 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 MIMT1-201ENST00000597105 1050 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AP003117.1-201ENST00000602771 554 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC005972.3-201ENST00000606304 481 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC112503.1-201ENST00000608436 391 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AL121772.2-201ENST00000614331 297 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC006065.5-201ENST00000623427 349 ntBASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TREX1Q9NSU2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 FRG1CP-201ENST00000358464 769 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 RNA5SP189-201ENST00000364920 115 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 RNU6-356P-201ENST00000384140 107 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL590704.1-201ENST00000402856 794 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AC105402.1-201ENST00000413336 545 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AC004987.3-201ENST00000413879 771 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AP000907.1-201ENST00000428428 510 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AC008065.1-201ENST00000428525 348 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 TPTE2P1-204ENST00000435256 593 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 CYCSP43-201ENST00000438233 310 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AC105402.2-201ENST00000438503 358 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 HMGN2P21-201ENST00000447764 270 ntBASIC3.51□□□□□ -1.85
TREX1Q9NSU2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.51□□□□□ -1.85
TREX1Q9NSU2 RPS4XP2-201ENST00000458402 793 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms