Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FAR1P1-201ENST00000427163 934 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 RPL23AP4-201ENST00000427757 463 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 BTG3P1-201ENST00000435859 716 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC074250.1-201ENST00000511117 192 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 SMARCE1P4-201ENST00000523647 241 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 CBX3P5-201ENST00000552017 521 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC005412.1-201ENST00000580812 1049 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AC009318.3-201ENST00000616916 503 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 CFTRP2-201ENST00000634304 199 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CISHQ9NSE2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CISHQ9NSE2 AL133383.2-201ENST00000622958 2336 ntBASIC3.48□□□□□ -1.85
CISHQ9NSE2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 SNORA63.1-201ENST00000362493 131 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 Z75741.1-201ENST00000446793 314 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 Z99127.3-201ENST00000448158 395 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 RFPL1S-203ENST00000539579 330 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 VN1R84P-201ENST00000593697 235 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 AC024220.1-201ENST00000603675 484 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 AC009452.1-201ENST00000640823 606 ntBASIC3.47□□□□□ -1.85
CISHQ9NSE2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CISHQ9NSE2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.47□□□□□ -1.85
CISHQ9NSE2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CISHQ9NSE2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.46□□□□□ -1.85
CISHQ9NSE2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CISHQ9NSE2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 MIR34B-201ENST00000385076 84 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AL357075.1-201ENST00000404107 726 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 RPL7P53-201ENST00000421245 739 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AL158156.1-201ENST00000422509 473 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 VN1R96P-201ENST00000446052 858 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 BTF3P5-201ENST00000457252 467 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 RPL7P49-201ENST00000471402 708 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 MIR2682-201ENST00000580305 110 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC008507.1-201ENST00000587506 734 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.46□□□□□ -1.86
CISHQ9NSE2 MIR8058-201ENST00000615737 89 ntBASIC3.46□□□□□ -1.86
CISHQ9NSE2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CISHQ9NSE2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms