Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 ELOCP31-201ENST00000540463 467 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AC034105.2-201ENST00000561866 238 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 RPL23AP90-201ENST00000603820 236 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 U1.41-201ENST00000617626 165 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AL512652.1-201ENST00000619006 500 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 BMS1P21-201ENST00000634565 365 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 HLA-B-257ENST00000640094 147 ntBASIC8.22□□□□□ -1.09
RTN4Q9NQC3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.22□□□□□ -1.09
RTN4Q9NQC3 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.21□□□□□ -1.09
RTN4Q9NQC3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RTN4Q9NQC3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RTN4Q9NQC3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AL157713.1-201ENST00000379752 1531 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNU6-335P-201ENST00000364563 113 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AL139327.1-201ENST00000382988 348 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNU6-474P-201ENST00000384243 107 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNU6-45P-201ENST00000384471 107 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNU6-738P-201ENST00000384531 106 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNU6-1160P-201ENST00000384546 104 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 MIR106B-201ENST00000385301 82 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 MIR1290-201ENST00000408735 78 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AL451136.1-201ENST00000435399 325 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC005040.1-201ENST00000437783 482 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 FO393419.1-201ENST00000443746 355 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RN7SL332P-201ENST00000482163 254 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC063943.2-201ENST00000495697 534 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 RNA5SP278-201ENST00000517055 102 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 FAM60BP-201ENST00000578364 658 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 SNORD91B-202ENST00000608459 222 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AL121985.2-201ENST00000621192 555 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 AC129908.1-201ENST00000624553 648 ntBASIC8.21□□□□□ -1.1
RTN4Q9NQC3 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RTN4Q9NQC3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC093671.1-201ENST00000624981 2929 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 PPIAP22-201ENST00000358455 498 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNA5SP263-201ENST00000363376 128 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNU4-59P-201ENST00000364447 116 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNA5SP235-201ENST00000365411 114 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNU6-1181P-201ENST00000384191 106 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC092809.3-201ENST00000415453 231 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RPL21P109-201ENST00000422213 475 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC093107.1-201ENST00000422772 609 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 Z82205.1-201ENST00000428456 297 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC093414.1-201ENST00000434712 514 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 HMGB3P22-202ENST00000451823 572 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RN7SL19P-201ENST00000462522 306 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AL163540.1-201ENST00000485382 386 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC110792.1-201ENST00000491826 472 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNU6-1016P-201ENST00000516689 94 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNU1-54P-201ENST00000517181 120 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RNU6-323P-201ENST00000521915 107 ntBASIC8.2□□□□□ -1.1
RTN4Q9NQC3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.2□□□□□ -1.1
RTN4Q9NQC3 SNRPGP18-201ENST00000553000 214 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms