Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSU72Q9NP77 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 CDC27P2-201ENST00000425026 1922 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 NACAP2-201ENST00000318548 624 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 RNU6-43P-201ENST00000384302 107 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 MIR137-201ENST00000385223 102 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 RNU6-316P-201ENST00000391027 107 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 NDUFB4P5-201ENST00000415445 361 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 RPL36AP36-201ENST00000418616 301 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 MTCYBP8-201ENST00000422855 651 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC023141.3-201ENST00000436698 278 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 YWHAZP8-201ENST00000436935 731 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AL049734.2-201ENST00000441066 616 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AL596266.1-201ENST00000448132 400 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 PRPF38AP1-201ENST00000451976 933 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 HMGN2P26-201ENST00000463169 339 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 UBFD1P1-201ENST00000473259 814 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 RPL7AP10-201ENST00000481016 791 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 RN7SL570P-201ENST00000484405 292 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC016559.2-201ENST00000510759 359 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 EIF3KP3-201ENST00000514461 639 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC079075.1-201ENST00000559543 878 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC040958.1-201ENST00000561102 201 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC024267.2-201ENST00000582737 417 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC006504.6-201ENST00000590142 199 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC068768.2-201ENST00000602352 343 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 BBIP1P1-201ENST00000602999 279 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC104237.2-201ENST00000612456 443 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 AC092125.1-201ENST00000562568 1995 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.64□□□□□ -1.51
SSU72Q9NP77 VPS35P1-201ENST00000563400 1518 ntBASIC5.64□□□□□ -1.51
SSU72Q9NP77 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSU72Q9NP77 OR4G1P-203ENST00000641984 1631 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 Y_RNA.144-201ENST00000363521 113 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 Y_RNA.146-201ENST00000363549 102 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 RNU6-1097P-201ENST00000363586 107 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 MIR188-201ENST00000385034 86 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL031679.1-201ENST00000400616 525 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL356967.1-201ENST00000406305 431 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 NCOR1P3-201ENST00000420479 303 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 TCEA1P1-201ENST00000449716 880 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 Y_RNA.639-201ENST00000458981 102 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP001025.2-201ENST00000490908 477 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP002453.1-201ENST00000492327 668 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSU72Q9NP77 HMGN1P16-201ENST00000508308 283 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC139365.2-201ENST00000517972 253 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC131935.1-201ENST00000524621 333 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP004607.5-201ENST00000532034 217 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.63□□□□□ -1.51
SSU72Q9NP77 RN7SL290P-201ENST00000578661 300 ntBASIC5.63□□□□□ -1.51
SSU72Q9NP77 AP005119.1-201ENST00000580956 292 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms