Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 SNORA62.6-201ENST00000606322 83 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 FRG1DP-201ENST00000635586 771 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 AL590396.2-201ENST00000636511 1041 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 AC017104.5-201ENST00000637647 639 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 MTND4P8-201ENST00000514997 1362 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 MTCO1P18-201ENST00000455518 1419 ntBASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
LRRC40Q9H9A6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRRC40Q9H9A6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRRC40Q9H9A6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.84□□□□□ -1.8
LRRC40Q9H9A6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRRC40Q9H9A6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LRRC40Q9H9A6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 ENSAP3-201ENST00000312710 333 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 SNORA31-201ENST00000362607 130 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 RNA5SP189-201ENST00000364920 115 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 Z98941.1-201ENST00000407764 100 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 UBE2V1P11-201ENST00000411559 285 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 PTP4A1P5-201ENST00000420305 455 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 RSL24D1P6-201ENST00000426934 401 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AL365396.1-201ENST00000430854 671 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AL513175.1-201ENST00000431492 780 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 ZFAND6P1-201ENST00000434138 605 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC010460.1-201ENST00000507087 466 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC008885.2-201ENST00000509506 930 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 RN7SKP83-201ENST00000516512 178 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 OR4C2P-201ENST00000530855 1064 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 CYCSP30-201ENST00000546447 172 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 PARP1P2-201ENST00000556806 195 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AGGF1P6-201ENST00000569213 976 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 MIR4504-201ENST00000577413 92 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC091488.1-201ENST00000604239 660 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC079684.1-201ENST00000621405 437 ntBASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRC40Q9H9A6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC026951.1-201ENST00000559530 2459 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC066616.2-201ENST00000559334 1481 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SEPT7P7-201ENST00000420492 1301 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RNA5SP27-201ENST00000363839 119 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RNA5SP283-201ENST00000365604 119 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RNA5SP424-201ENST00000390988 115 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 UBE2V1P1-201ENST00000430836 445 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SETD6P1-201ENST00000444575 317 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RPL6P5-201ENST00000445678 828 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RN7SL323P-201ENST00000494712 295 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AC006960.3-201ENST00000561845 705 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms