Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SETP14-201ENST00000497538 873 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC010627.1-201ENST00000503819 1294 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 HMGN1P15-201ENST00000513870 295 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 RN7SKP13-201ENST00000515933 244 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 RNU2-27P-201ENST00000516185 142 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC067852.3-201ENST00000589177 561 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ABI1P1-201ENST00000603375 1120 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC069209.1-201ENST00000619282 651 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AL713922.2-201ENST00000619384 716 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC009452.1-201ENST00000640823 606 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC234772.1-201ENST00000377927 937 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC017083.1-201ENST00000428093 483 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AL159987.2-201ENST00000432754 307 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC236972.1-201ENST00000433225 199 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 RPS3AP46-201ENST00000448352 682 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 RN7SKP18-201ENST00000516005 275 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC090136.1-201ENST00000520009 240 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 AC007423.1-201ENST00000605009 627 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 MIR3651-201ENST00000630427 90 ntBASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF3BQ9BZI7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AP001486.2-201ENST00000561652 5113 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AP002088.1-201ENST00000382740 395 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 OR6C71P-201ENST00000432580 913 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AP000563.1-201ENST00000490865 758 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 MIR2276-201ENST00000516886 89 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 RN7SKP57-201ENST00000517248 293 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 RMST_8.1-201ENST00000610287 165 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AC000123.2-201ENST00000623124 461 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 PRO1804-201ENST00000623780 2050 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 AL118496.1-201ENST00000440201 1812 ntBASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.16□□□□□ -1.74
UPF3BQ9BZI7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
UPF3BQ9BZI7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 RNA5SP267-201ENST00000364893 126 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 SNORD6-201ENST00000365444 73 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC073069.1-201ENST00000428657 441 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 RNU7-170P-201ENST00000459303 61 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC004801.2-202ENST00000463559 283 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 MTND6P6-201ENST00000478031 263 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 RN7SKP289-201ENST00000517244 295 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 TGIF1P1-201ENST00000558095 802 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 MIR4425-201ENST00000580572 84 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 AP003355.3-201ENST00000623465 114 ntBASIC4.15□□□□□ -1.75
UPF3BQ9BZI7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms