Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 URM1-204ENST00000452446 2944 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR370-201ENST00000362135 75 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RNA5SP258-201ENST00000362750 119 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RNU6-382P-201ENST00000365181 106 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 DYNLT3P1-201ENST00000378574 347 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORD14D-201ENST00000384390 87 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORD45A-201ENST00000384512 84 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR34C-201ENST00000384831 77 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR646-201ENST00000385067 94 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR514A1-201ENST00000385133 98 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR498-201ENST00000385134 124 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR629-201ENST00000385230 97 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA48-201ENST00000386847 135 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR548T-201ENST00000408369 74 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SKP151-201ENST00000410230 316 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SNORA36B-201ENST00000410438 131 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SKP108-201ENST00000411367 328 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC009237.10-201ENST00000414112 510 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC092373.1-201ENST00000414951 490 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC016909.1-201ENST00000415916 166 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC138623.1-201ENST00000418060 216 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AL353621.1-201ENST00000418219 243 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 Z83839.1-201ENST00000423412 630 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC092047.1-201ENST00000424997 240 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AKR1B1P1-201ENST00000429105 956 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 USP9YP7-201ENST00000436723 430 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 IFNWP18-201ENST00000437472 591 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RPS19P6-201ENST00000441327 433 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MTND6P5-201ENST00000448266 512 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 GCNT1P5-201ENST00000449274 682 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 USP9YP32-201ENST00000452432 430 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 snoU109.2-201ENST00000459316 135 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC026336.1-201ENST00000466577 351 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC009127.1-201ENST00000467090 155 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RPL30P12-201ENST00000474666 353 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC098818.1-201ENST00000478593 252 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RNF7P1-201ENST00000478598 342 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RPL36AP48-201ENST00000485521 314 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 PPIAP19-201ENST00000486414 492 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL632P-201ENST00000489734 266 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC133435.1-201ENST00000498753 576 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RFPL4AP3-201ENST00000515267 345 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC008667.1-201ENST00000515296 568 ntTSL 4 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC233724.2-201ENST00000515727 271 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SCARNA15-202ENST00000516881 127 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CYCSP22-201ENST00000517555 339 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC124290.2-201ENST00000519431 286 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC084125.3-201ENST00000529377 398 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AP001767.1-201ENST00000530976 286 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 TUBB4BP1-201ENST00000545422 178 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC119044.1-201ENST00000553227 404 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC092120.2-201ENST00000567166 415 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RN7SL783P-201ENST00000577950 301 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR3650-201ENST00000581972 60 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC004448.4-211ENST00000582654 485 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 FAM197Y2-203ENST00000598351 776 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LYPLA2P2-201ENST00000600506 676 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AL355989.2-201ENST00000603304 512 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR8053-201ENST00000613344 75 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms