Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AL109741.3-201ENST00000561748 592 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AGGF1P8-201ENST00000562979 1000 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 VN1R79P-201ENST00000593540 513 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC007685.1-201ENST00000329806 452 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 OR6K3-202ENST00000368146 996 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC127526.1-201ENST00000417526 366 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC244453.4-201ENST00000419150 388 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC074367.1-201ENST00000438685 1125 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 RPS15AP29-201ENST00000445539 400 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 RPS4XP10-201ENST00000465034 731 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 RPL23AP73-201ENST00000492507 471 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AL034351.1-201ENST00000605288 668 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 MIR7851-201ENST00000610611 160 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC119674.1-220ENST00000641502 1048 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 BX005019.1-201ENST00000561881 1810 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 AC007529.1-201ENST00000418574 2178 ntBASIC4.32□□□□□ -1.72
RPAP1Q9BWH6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 RNA5SP50-201ENST00000363731 107 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 MIR421-201ENST00000365696 85 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 RNF19BPX-201ENST00000426224 625 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 RPL21P110-201ENST00000433345 446 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AL353898.1-201ENST00000444055 238 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC084357.1-201ENST00000473404 255 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC021087.2-201ENST00000504656 1203 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC021146.7-201ENST00000509604 775 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC108471.1-201ENST00000513977 287 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AC119751.5-201ENST00000514077 770 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 RMST_8.1-201ENST00000610287 165 ntBASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.31□□□□□ -1.72
RPAP1Q9BWH6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 RNU6-225P-201ENST00000384613 103 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 U3.39-201ENST00000408569 239 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC096664.2-201ENST00000411843 406 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AL159169.1-201ENST00000421119 127 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC005326.1-201ENST00000429197 123 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 CLIC4P1-201ENST00000453177 535 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 RPL32P34-201ENST00000486380 400 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 HMGB3P14-201ENST00000494195 599 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 FCF1P3-201ENST00000496394 590 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 GTF2IP8-201ENST00000560687 584 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC006116.10-201ENST00000591836 581 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC073111.2-201ENST00000605657 1075 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AP003355.3-201ENST00000623465 114 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 AC009313.2-201ENST00000417893 1941 ntBASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPAP1Q9BWH6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms