Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 TRAV15-201ENST00000556680 249 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC006960.3-201ENST00000561845 705 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 VN1R84P-201ENST00000593697 235 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 Z82195.1-201ENST00000604558 398 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 MIR6820-201ENST00000611508 62 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC008759.3-201ENST00000613300 508 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC078880.5-201ENST00000617845 421 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC007275.1-201ENST00000621243 671 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC119744.1-201ENST00000454746 1715 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 MTND4P10-201ENST00000446199 1363 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 SAGE2P-201ENST00000420011 2126 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC007656.2-201ENST00000624902 4547 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL512646.1-201ENST00000269395 1077 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC126755.2-208ENST00000327792 462 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC138969.1-213ENST00000331436 462 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RNU1-87P-201ENST00000363727 170 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP239-201ENST00000410218 129 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL024507.1-201ENST00000412741 274 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC004022.2-201ENST00000413824 193 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC234782.4-201ENST00000417646 1048 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 DEFB130D-201ENST00000426866 237 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 FTH1P6-201ENST00000430768 320 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RPS7P2-201ENST00000435134 607 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 HMGB1P45-201ENST00000435986 653 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 ELOCP11-201ENST00000436690 332 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL645931.1-201ENST00000439737 410 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 ELOCP16-201ENST00000444494 332 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RPL6P5-201ENST00000445678 828 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC096992.1-201ENST00000459808 709 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC006463.2-201ENST00000473326 348 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RPS4XP6-201ENST00000477670 797 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AP000926.1-201ENST00000479573 241 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC011037.1-201ENST00000483964 558 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC092045.1-201ENST00000495716 1231 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 FTH1P21-201ENST00000512179 511 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 IGKV2D-23-201ENST00000518179 286 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC007424.1-203ENST00000554613 687 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC023825.1-201ENST00000566704 1030 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 MIR4284-201ENST00000578924 81 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 MIR4512-201ENST00000583257 77 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 PCNAP1-202ENST00000595299 752 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 MTATP6P2-201ENST00000603319 678 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC069304.3-201ENST00000603938 1084 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL163642.2-201ENST00000604722 1019 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC010857.1-201ENST00000606398 594 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL109620.1-201ENST00000618738 1197 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC112484.5-201ENST00000624189 228 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AC009452.1-201ENST00000640823 606 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDHD3Q9BSH5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC095050.2-201ENST00000510748 1458 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms