Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ABCA3Q99758 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ABCA3Q99758 OR5BR1P-201ENST00000524992 1330 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.23□□□□□ -1.73
ABCA3Q99758 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ABCA3Q99758 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ABCA3Q99758 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ABCA3Q99758 MIR1261-201ENST00000408659 82 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 RNA5SP293-201ENST00000410527 113 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 AC126124.2-201ENST00000413542 321 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 RPL7L1P1-201ENST00000448259 785 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.23□□□□□ -1.73
ABCA3Q99758 AC087312.1-201ENST00000471411 480 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 AC069499.1-201ENST00000489433 509 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 RNU1-41P-201ENST00000516161 162 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 RNU1-48P-201ENST00000516400 162 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ABCA3Q99758 AP002404.1-201ENST00000532005 451 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 AC011270.1-201ENST00000558606 583 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 AC106785.3-201ENST00000564064 847 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
ABCA3Q99758 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.23□□□□□ -1.73
ABCA3Q99758 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ABCA3Q99758 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ABCA3Q99758 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ABCA3Q99758 BMS1P22-201ENST00000414726 313 ntBASIC4.22□□□□□ -1.73
ABCA3Q99758 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.22□□□□□ -1.73
ABCA3Q99758 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.22□□□□□ -1.73
ABCA3Q99758 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 AL360157.1-201ENST00000565962 87 ntBASIC4.22□□□□□ -1.73
ABCA3Q99758 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.22□□□□□ -1.73
ABCA3Q99758 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.22□□□□□ -1.73
ABCA3Q99758 AC074276.2-201ENST00000619891 348 ntBASIC4.22□□□□□ -1.73
ABCA3Q99758 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ABCA3Q99758 AC139713.2-210ENST00000641741 992 ntBASIC4.22□□□□□ -1.73
ABCA3Q99758 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.22□□□□□ -1.73
ABCA3Q99758 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ABCA3Q99758 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.22□□□□□ -1.73
ABCA3Q99758 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
ABCA3Q99758 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ABCA3Q99758 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
ABCA3Q99758 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.21□□□□□ -1.73
ABCA3Q99758 HMGB1P3-201ENST00000502802 616 ntBASIC4.21□□□□□ -1.73
ABCA3Q99758 AC009812.2-201ENST00000517657 457 ntBASIC4.21□□□□□ -1.73
ABCA3Q99758 H3F3AP1-201ENST00000559984 334 ntBASIC4.21□□□□□ -1.73
ABCA3Q99758 AC015849.2-201ENST00000605738 409 ntBASIC4.21□□□□□ -1.73
ABCA3Q99758 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ABCA3Q99758 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ABCA3Q99758 RPL7P8-201ENST00000411964 730 ntBASIC4.21□□□□□ -1.74
ABCA3Q99758 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.21□□□□□ -1.74
ABCA3Q99758 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCA3Q99758 AC034159.1-201ENST00000513885 583 ntBASIC4.21□□□□□ -1.74
ABCA3Q99758 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.21□□□□□ -1.74
ABCA3Q99758 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.21□□□□□ -1.74
ABCA3Q99758 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.21□□□□□ -1.74
ABCA3Q99758 AL139395.1-201ENST00000603662 160 ntBASIC4.21□□□□□ -1.74
ABCA3Q99758 OR2AS2P-201ENST00000606902 342 ntBASIC4.21□□□□□ -1.74
ABCA3Q99758 AC004832.5-201ENST00000608677 401 ntBASIC4.21□□□□□ -1.74
ABCA3Q99758 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ABCA3Q99758 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ABCA3Q99758 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCA3Q99758 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCA3Q99758 RNA5SP104-201ENST00000410989 118 ntBASIC4.2□□□□□ -1.74
ABCA3Q99758 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.2□□□□□ -1.74
ABCA3Q99758 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCA3Q99758 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.2□□□□□ -1.74
ABCA3Q99758 AC112492.1-201ENST00000449607 712 ntBASIC4.2□□□□□ -1.74
ABCA3Q99758 SLC31A1P1-201ENST00000451221 567 ntBASIC4.2□□□□□ -1.74
ABCA3Q99758 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.2□□□□□ -1.74
ABCA3Q99758 RN7SL432P-201ENST00000484057 298 ntBASIC4.2□□□□□ -1.74
ABCA3Q99758 snoU109.6-201ENST00000516831 118 ntBASIC4.2□□□□□ -1.74
ABCA3Q99758 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.2□□□□□ -1.74
ABCA3Q99758 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ABCA3Q99758 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.2□□□□□ -1.74
ABCA3Q99758 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ABCA3Q99758 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.19□□□□□ -1.74
ABCA3Q99758 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 AL356968.1-201ENST00000416622 474 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 AC019097.1-201ENST00000424783 735 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 AC128713.1-201ENST00000471495 306 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 AC107934.2-201ENST00000518653 310 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.19□□□□□ -1.74
ABCA3Q99758 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.19□□□□□ -1.74
ABCA3Q99758 AC015917.1-201ENST00000579654 510 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 IGHVIII-44-202ENST00000636235 289 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ABCA3Q99758 MTCO1P8-201ENST00000416914 1523 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 AP003122.5-201ENST00000527668 3766 ntBASIC4.19□□□□□ -1.74
ABCA3Q99758 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ABCA3Q99758 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ABCA3Q99758 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms