Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC119744.1-201ENST00000454746 1715 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.60-201ENST00000362831 98 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.81-201ENST00000362997 102 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 Y_RNA.100-201ENST00000363141 102 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 RNU2-9P-201ENST00000410194 145 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AL662874.1-201ENST00000426065 230 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 Z93242.1-201ENST00000427102 353 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 OR2AS1P-201ENST00000427827 319 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 CFL1P1-202ENST00000432948 411 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 HMGB3P10-201ENST00000434734 572 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 RPL21P23-201ENST00000446654 460 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC002553.2-201ENST00000453217 340 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC104308.1-201ENST00000454621 333 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 MTCO1P42-201ENST00000457379 726 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 COPS8P2-201ENST00000473228 627 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 RN7SL727P-201ENST00000482164 296 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 CR383656.1-201ENST00000484916 377 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC026784.1-201ENST00000507986 352 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 Vault.3-201ENST00000516676 95 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AP003181.2-201ENST00000528941 181 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC007494.1-201ENST00000562293 760 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AP003789.1-201ENST00000617737 605 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AL354950.2-201ENST00000617939 290 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 PNPT1P2-201ENST00000456768 2050 ntBASIC6.94□□□□□ -1.3
TRIM47Q96LD4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TRIM47Q96LD4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RN7SKP128-201ENST00000364270 303 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RNU6-432P-201ENST00000384196 109 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RNU4-64P-201ENST00000410795 131 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RPL21P91-201ENST00000429231 479 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 FABP7P2-201ENST00000429946 379 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC092809.1-201ENST00000441469 474 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RN7SL826P-201ENST00000479724 288 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC073522.1-201ENST00000483312 377 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 RN7SL57P-201ENST00000493687 290 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 POU5F1P7-201ENST00000508759 541 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 OR4P1P-201ENST00000530808 1136 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MIR3128-201ENST00000581957 66 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MIR5690-201ENST00000583739 73 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 IMMP1LP3-201ENST00000604197 224 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC015922.4-201ENST00000612568 690 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 MIR6128-201ENST00000615528 109 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.93□□□□□ -1.3
TRIM47Q96LD4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM47Q96LD4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms