Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
USP47Q96K76 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP47Q96K76 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 AL353743.1-202ENST00000431724 1695 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 RPS4XP5-202ENST00000449995 1334 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.61□□□□□ -1.67
USP47Q96K76 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP47Q96K76 AC107021.2-201ENST00000567714 2095 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 MIR423-201ENST00000362201 94 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 RNU6-697P-201ENST00000363348 107 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 UBA52P6-201ENST00000399822 382 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.61□□□□□ -1.67
USP47Q96K76 AC127526.1-201ENST00000417526 366 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 GLRXP1-201ENST00000423261 334 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 MTND4LP12-201ENST00000448237 295 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.61□□□□□ -1.67
USP47Q96K76 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.61□□□□□ -1.67
USP47Q96K76 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.61□□□□□ -1.67
USP47Q96K76 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.61□□□□□ -1.67
USP47Q96K76 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.61□□□□□ -1.67
USP47Q96K76 PHBP14-201ENST00000512887 367 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.61□□□□□ -1.67
USP47Q96K76 RN7SKP116-201ENST00000516902 319 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.61□□□□□ -1.67
USP47Q96K76 IGLVIV-53-201ENST00000520107 367 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.61□□□□□ -1.67
USP47Q96K76 MTND2P13-201ENST00000577438 1039 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 AC024023.1-201ENST00000624530 922 ntBASIC4.61□□□□□ -1.67
USP47Q96K76 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP47Q96K76 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP47Q96K76 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP47Q96K76 RNA5SP31-201ENST00000411144 127 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AL831737.1-201ENST00000441288 271 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.6□□□□□ -1.67
USP47Q96K76 RPS6P2-201ENST00000454208 705 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 UBE2DNL-203ENST00000474922 222 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 RPS27AP18-201ENST00000515536 459 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.6□□□□□ -1.67
USP47Q96K76 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.6□□□□□ -1.67
USP47Q96K76 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.6□□□□□ -1.67
USP47Q96K76 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.6□□□□□ -1.67
USP47Q96K76 AC122134.1-201ENST00000565664 1104 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AC015917.1-201ENST00000579654 510 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 MIR2682-201ENST00000580305 110 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AC125494.3-201ENST00000602759 455 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AL606834.2-201ENST00000602954 668 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 AL162713.1-201ENST00000604480 262 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 NF1P10-201ENST00000613227 742 ntBASIC4.6□□□□□ -1.67
USP47Q96K76 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.6□□□□□ -1.67
USP47Q96K76 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USP47Q96K76 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
USP47Q96K76 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.6□□□□□ -1.67
USP47Q96K76 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP47Q96K76 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
USP47Q96K76 RLIMP2-201ENST00000427891 1563 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 RNA5SP374-201ENST00000362939 125 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.59□□□□□ -1.67
USP47Q96K76 MIR184-201ENST00000384962 84 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.59□□□□□ -1.67
USP47Q96K76 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.59□□□□□ -1.67
USP47Q96K76 AL353705.1-201ENST00000433468 480 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 BX679664.1-201ENST00000434429 253 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AC127537.2-201ENST00000439258 465 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.59□□□□□ -1.67
USP47Q96K76 AL671855.1-201ENST00000446875 1203 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AC010401.1-201ENST00000463867 348 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP47Q96K76 AC105918.1-201ENST00000474399 838 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 OR9N1P-201ENST00000491296 333 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AP001636.2-201ENST00000525517 696 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 HIGD1AP1-201ENST00000550979 275 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.59□□□□□ -1.67
USP47Q96K76 EIF4BP1-201ENST00000554881 351 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.59□□□□□ -1.67
USP47Q96K76 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.59□□□□□ -1.67
USP47Q96K76 AC100793.4-201ENST00000613683 429 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 AL157817.1-201ENST00000614264 790 ntBASIC4.59□□□□□ -1.67
USP47Q96K76 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USP47Q96K76 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
USP47Q96K76 HSPA8P17-201ENST00000427029 1382 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.58□□□□□ -1.68
USP47Q96K76 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP47Q96K76 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
USP47Q96K76 AL024507.1-201ENST00000412741 274 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.58□□□□□ -1.68
USP47Q96K76 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP47Q96K76 AP000936.3-201ENST00000438127 255 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 AC002553.2-201ENST00000453217 340 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 CCDC75P1-201ENST00000469247 791 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.58□□□□□ -1.68
USP47Q96K76 AC023141.12-201ENST00000512399 199 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 IGHV3-32-201ENST00000519182 355 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.58□□□□□ -1.68
USP47Q96K76 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP47Q96K76 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.58□□□□□ -1.68
USP47Q96K76 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.58□□□□□ -1.68
USP47Q96K76 MIR5680-201ENST00000577577 84 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms