Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC004980.3-201ENST00000447046 365 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 SNORD42A-201ENST00000459584 64 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AL591473.1-201ENST00000464297 313 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 TMED11P-201ENST00000479478 690 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 MRPS33P2-201ENST00000507850 322 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RN7SKP298-201ENST00000515950 94 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 SNORA48.10-201ENST00000516965 160 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 RN7SKP283-201ENST00000517197 270 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 NPM1P6-201ENST00000521088 871 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC239860.2-201ENST00000525886 270 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC093249.4-201ENST00000564755 259 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC091489.2-201ENST00000566263 604 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 MIR548S-201ENST00000581352 82 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 MIR8069-1-201ENST00000616627 86 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 uc_338.9-201ENST00000617424 182 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 MIR8069-2-201ENST00000621412 86 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AP002505.2-201ENST00000623585 696 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC026634.1-201ENST00000634369 198 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 OR5BR1P-201ENST00000524992 1330 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 AC125336.1-201ENST00000508893 2827 ntBASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHAMP1Q96JM3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC016716.1-201ENST00000265882 708 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL512646.1-201ENST00000269395 1077 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 SNORA73.1-201ENST00000363107 205 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 SNORA51.12-201ENST00000384448 134 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.554-201ENST00000384672 102 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 MTCYBP36-201ENST00000404146 440 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 RNU6-248P-201ENST00000410720 107 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 RPL17P12-201ENST00000413391 526 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 FABP7P1-201ENST00000424004 391 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL022238.1-201ENST00000442557 355 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC000111.2-201ENST00000448200 210 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC108751.2-201ENST00000469993 231 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 MTND6P6-201ENST00000478031 263 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AP000797.1-201ENST00000478870 387 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 OR4G11P-201ENST00000492842 939 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 IGKV2-36-201ENST00000519999 223 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC027309.2-201ENST00000520566 192 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC008562.1-201ENST00000521763 330 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 COX6B1P6-201ENST00000522347 255 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 DEFB131D-201ENST00000526803 184 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 ZNF519P2-201ENST00000557032 169 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 MIR3934-201ENST00000579806 107 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC006363.1-201ENST00000603806 463 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC091953.3-201ENST00000623220 236 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 AC015726.3-201ENST00000624501 418 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 OR5H6-203ENST00000642105 978 ntBASIC5.69□□□□□ -1.5
CHAMP1Q96JM3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms