Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 CKS1BP6-201ENST00000424932 240 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC010881.1-201ENST00000433830 235 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 B3GNT2P1-201ENST00000434960 952 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL162388.1-201ENST00000450912 352 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 HMGB3P21-201ENST00000452483 547 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL024509.2-201ENST00000493462 493 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 GAPDHP56-201ENST00000506031 988 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 ATP1B1P1-201ENST00000509767 915 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 KRT19P6-201ENST00000510983 209 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 RNU6-678P-201ENST00000516832 109 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC024909.2-201ENST00000553035 286 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC093519.1-201ENST00000566109 298 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC119751.7-201ENST00000600494 245 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL031985.2-201ENST00000600955 480 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 FAM25E-202ENST00000608562 189 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC245297.2-201ENST00000610119 565 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC015813.4-201ENST00000610469 179 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC005962.2-201ENST00000611427 652 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC008121.2-201ENST00000614647 523 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 AL031667.3-201ENST00000620124 655 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 PCMTD1P7-201ENST00000634506 357 ntBASIC4.71□□□□□ -1.66
VPS50Q96JG6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS50Q96JG6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC008549.2-201ENST00000333482 706 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 MIR448-201ENST00000362131 111 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 RNU1-108P-201ENST00000362556 161 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 RNU6-115P-201ENST00000364310 107 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 RNU4-75P-201ENST00000364621 146 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL138880.1-201ENST00000405824 642 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 HDGFP1-201ENST00000405943 252 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL450338.1-201ENST00000407987 512 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 OR2AM1P-201ENST00000422137 422 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC004448.2-201ENST00000422360 586 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 FABP7P1-201ENST00000424004 391 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 RPL37P1-201ENST00000432310 284 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 MTCO3P5-201ENST00000433620 714 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AL590103.1-201ENST00000434488 307 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 YWHAZP8-201ENST00000436935 731 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 MTCO2P18-201ENST00000457151 658 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 RNA5SP43-201ENST00000516559 110 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC021006.3-201ENST00000530771 192 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS50Q96JG6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC007954.1-201ENST00000554198 494 ntBASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS50Q96JG6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms