Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 U3.35-201ENST00000408405 208 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RNU6-603P-201ENST00000411403 107 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 CTSL3P-202ENST00000412179 788 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RPL17P12-201ENST00000413391 526 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RPL21P108-201ENST00000413857 481 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RPS7P13-201ENST00000413955 498 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 UBTFL3-201ENST00000418934 1024 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RGS17P1-201ENST00000423358 553 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 IPMKP1-201ENST00000425988 855 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AL451139.1-201ENST00000434718 346 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 VN1R10P-201ENST00000447106 875 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RPL39P6-201ENST00000448289 150 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 EPS15P1-201ENST00000448836 336 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TRGVB-201ENST00000453257 471 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 MTCO3P2-201ENST00000457365 171 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 snoU13.20-201ENST00000459180 104 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 UBTFL6-201ENST00000477929 1024 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 HMGB3P16-201ENST00000508037 287 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AF213884.2-201ENST00000510417 903 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AP000790.1-201ENST00000528891 737 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 BRD9P1-201ENST00000529855 560 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 OR6C7P-201ENST00000547875 934 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC245505.1-201ENST00000556398 224 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 BGLT3-201ENST00000564523 994 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 MIR5186-201ENST00000577504 120 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 RN7SL802P-201ENST00000577858 299 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 MIR4472-2-201ENST00000582069 67 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC107304.1-201ENST00000604229 296 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC115286.1-201ENST00000604298 434 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AL021997.1-201ENST00000605757 193 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 IRF5P1-201ENST00000504852 2164 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 AC083843.3-201ENST00000623679 2186 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 TLK1P1-201ENST00000456760 2440 ntBASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.51□□□□□ -1.69
CTHRC1Q96CG8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC000374.1-201ENST00000434698 1745 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 OR4G11P-202ENST00000642116 1414 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 OR4A15-201ENST00000314706 1035 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 RNU6-657P-201ENST00000383904 107 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL512430.2-201ENST00000406786 339 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 RN7SKP247-201ENST00000411094 308 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL133384.1-201ENST00000412744 351 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 RPS17P8-201ENST00000434525 335 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 YWHAZP8-201ENST00000436935 731 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL450263.2-201ENST00000439400 589 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC239367.2-201ENST00000447309 705 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC090686.1-201ENST00000481577 749 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 RN7SL809P-201ENST00000482040 297 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 RNU6-405P-201ENST00000516637 110 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms