Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 MFSD8-213ENST00000641134 1327 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 OR4A15-201ENST00000314706 1035 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 SNORA51.12-201ENST00000384448 134 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC136624.1-201ENST00000400791 413 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 NUP35P2-201ENST00000416748 943 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC010655.1-201ENST00000449336 292 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 MTCO3P16-201ENST00000454456 754 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AL133162.1-201ENST00000463228 453 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 GAPDHP36-201ENST00000480688 918 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 MTND2P26-201ENST00000528255 1029 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 ATP5F1P7-201ENST00000567330 760 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC087499.8-201ENST00000578406 226 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AL732372.2-225ENST00000642124 456 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
UBE2E3Q969T4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE2E3Q969T4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC008432.1-201ENST00000615912 1320 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 SNORA70E-201ENST00000384492 135 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AL603766.1-201ENST00000407763 664 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 RNA5SP239-201ENST00000410218 129 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 RN7SKP156-201ENST00000410308 342 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 RNU4-27P-201ENST00000410889 139 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 RPS15AP40-201ENST00000419621 391 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC091390.1-201ENST00000433904 331 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC004865.1-201ENST00000442276 1003 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 DNAJC19P8-201ENST00000452887 259 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC008280.2-201ENST00000455473 307 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 snoU13.7-201ENST00000459220 104 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC103987.1-201ENST00000473394 348 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC087385.1-201ENST00000475062 312 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC068587.1-201ENST00000483613 781 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 SERPINE4P-201ENST00000554978 281 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC079148.1-201ENST00000565944 819 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 MIR3160-1-201ENST00000577972 85 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC068724.3-201ENST00000625906 87 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 FAM157B-203ENST00000639350 358 ntBASIC3.55□□□□□ -1.84
UBE2E3Q969T4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
UBE2E3Q969T4 AC027287.1-201ENST00000553115 1453 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
UBE2E3Q969T4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
UBE2E3Q969T4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms